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. 2017 Dec 20;131(3):703–720. doi: 10.1007/s00122-017-3030-1

Table 1.

SNP datasets produced for assessment of genomic selection statistical models

SNP set Missing data per SNP site (%) Total number of SNPs Models tested
1 50 1,023,011 KGD, GBLUP, RF
2 10 249,546 GBLUP, RR, RF
3 1 43,966 GBLUP, RR, RF

RR ridge regression, RF random forest, KGD GBLUP using KGD-generated genomic relationship matrix