Table 3.

Analysis of variance results considering two measures of genomic predictive ability, the Pearson’s correlation between BLUP’s and GEBV’s and the slope of the regression of GEBV’s on BLUP’s, with statistical method and trait as factors

Accuracy measure	Source	df	SS	MS	F value	P value
Pearson correlation	Method	3	0.0039	0.0013	6.50	0.0004
	Trait	7	2.1105	0.3015	1505.95	< 0.0001
	Method × trait	21	0.0535	0.0026	12.72	< 0.0001
	Residual	128	0.0256	0.0002
Regression slope	Method	3	4.9230	1.6409	404.69	< 0.0001
	Trait	7	1.8710	0.2673	65.92	< 0.0001
	Method × trait	21	0.7570	0.0360	8.89	< 0.0001
	Residual	128	0.5190	0.0041