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. 2018 Feb 15;38(3):26. doi: 10.1007/s11032-018-0784-3

Table 2.

Height (HT) and wood density (WD) predictability (Pearson product-moment correlations between PBV-CV and phenotype) and prediction accuracy (Pearson product-moment correlation between PBV-CV and EBV-all) within and among models (ABLUP, GBLUP-A, GBLUP-AD, and GBLUP-ADE) using random and family folding (standard errors)

HT WD
PBV-CV1 EBV-all2 EBV-all2
Phenotype ABLUP GBLUP-A GBLUP-AD GBLUP-ADE Phenotype ABLUP GBLUP-A GBLUP-AD GBLUP-ADE
Random folding
 ABLUP 0.273 (0.004) 0.615 (0.003) 0.622 (0.003) 0.619 (0.003) 0.619 (0.003) 0.292 (0.003) 0.625 (0.002) 0.649 (0.002) 0.649 (0.002) 0.646 (0.002)
 GBLUP-A 0.283 (0.002) 0.571 (0.002) 0.690 (0.002) 0.689 (0.002) 0.689 (0.002) 0.257 (0.006) 0.545 (0.005) 0.694 (0.004) 0.694 (0.004) 0.695 (0.004)
 GBLUP-AD 0.276 (0.003) 0.563 (0.002) 0.682 (0.002) 0.681 (0.002) 0.681 (0.002) 0.262 (0.003) 0.547 (0.003) 0.698 (0.002) 0.698 (0.002) 0.699 (0.002)
 GBLUP-ADE 0.285(0.002) 0.570 (0.002) 0.688 (0.001) 0.688 (0.001) 0.688 (0.001) 0.257 (0.004) 0.544 (0.005) 0.691 (0.005) 0.691 (0.005) 0.693 (0.004)
Family folding
 ABLUP NA3 NA NA NA NA NA NA NA NA NA
 GBLUP-A 0.085 (0.004) 0.089 (0.010) 0.254 (0.011) 0.257 (0.011) 0.257 (0.011) − 0.021 (0.009) 0.019 (0.012) 0.204 (0.011) 0.205 (0.011) 0.220 (0.012)
 GBLUP-AD 0.087 (0.010) 0.100 (0.014) 0.266 (0.016) 0.271 (0.017) 0.271 (0.017) − 0.036 (0.012) 0.010 (0.014) 0.189 (0.015) 0.191 (0.015) 0.207 (0.015)
 GBLUP-ADE 0.084 (0.009) 0.093 (0.014) 0.255 (0.015) 0.258 (0.015) 0.258 (0.015) − 0.038 (0.008) 0.001 (0.010) 0.184 (0.010) 0.186 (0.009) 0.202 (0.009)

1PBV-CV: predicted breeding values using cross-validation

2EBV-all: estimated breeding values using all data

3NA: predicted individual additive breeding value is equal to the overall mean of the model