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. 2018 Jan 9;46(3):1295–1307. doi: 10.1093/nar/gkx1277

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© The Author(s) 2018. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 3. — C. nigoni genome assembly strategies. (A) Evaluation of the effect of Hi-C sequencing depth on scaffolding of contigs assembled with SLRs. Shown is plotting of the contig percentage that can be incorporated into scaffold (Y axis) against genomic coverage of Hi-C data (X axis). (B) Comparison of scaffold N50 sizes with different assembly strategies. Shown are plottings of log₁₀ scale of N50 size (bp) achieved with various assembly method. SLR: contigs assembled with Illumina Synthetic long reads only. cbr, C. briggsae; cni, C. nigoni.