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. Author manuscript; available in PMC: 2018 Feb 16.
Published in final edited form as: Comput Biol Chem. 2004 Apr;28(2):97–107. doi: 10.1016/j.compbiolchem.2003.12.003

Table 1.

Average recall and precision for three-state ‘mixed’, three-state ‘pure’, and one-state models at cut-off ranks of 20, 100, and 1,000

20 HMM-3M HMM-3P HMM-1
Recall 0.448 0.418 0.198
Precision 0.706 0.684 0.324
100 HMM-3M HMM-3P HMM-1
Recall 0.691 0.649 0.404
Precision 0.412 0.376 0.217
1000 HMM-3M HMM-3P HMM-1
Recall 0.909 0.898 0.773
Precision 0.100 0.096 0.070

Score calculation based on the forward algorithm.