Table 1.
Identification and classification of HRGPs in pear genome
| Family | Subfamily | Searching Strategies | HRGPs with SP | HRGPs with GPI | Total |
|---|---|---|---|---|---|
| EXT | SP3 | > = 2 SPPP | 19 | 3 | 56 |
| SP4 | > = 2 SPPPP | 16 | 2 | 33 | |
| SP5 | > = 2 SPPPPP | 16 | 0 | 26 | |
| AGP | EXT-AGPs | > 10%PAST& SP motif | 33 | 4 | 54 |
| AG-peptides | > 10% PAST & AA < 90 | 15 | 5 | 126 | |
| lysine-AGPs | > 10%PAST& Lysine rich Domain | 33 | 10 | 183 | |
| FLAs | > 10%PAST&Fasciclin Domain | 5 | 3 | 7 | |
| Classical AGPs | > 30% PAST | 44 | 24 | 152 | |
| PRP | PRP | PPV.[KC] | 17 | 0 | 201 |
Note: SP refers to signal peptide; GPI refers to glycosylphosphatidylinositol