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. 2018 Feb 14;9:108. doi: 10.3389/fpls.2018.00108

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Copyright © 2018 Lamarre, Frasse, Zouine, Labourdette, Sainderichin, Hu, Le Berre-Anton, Bouzayen and Maza.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Number of DE genes depending on the depth (A) and on the replicate number (B). Stability of the number of DE genes depending on the depth (C) and on the replicate number (D). Symbol colors correspond to the replicate numbers for (A,C) and to the library sizes for (B,D). Colored circles, triangles, and squares represent, respectively the values obtained with all genes, high expressed genes, and low expressed genes. Colored circles, triangles, and squares that are surrounded with a black line correspond to combinations of library sizes and replicate numbers with a total amount of 40 M reads approximately.