Table 2.

Selected target genes

Category	Target
ampC resistances	ACC; ACT/MIR; ampC; BIL/LAT/CMY; DHA; FOX; MOX/CMY
Carbapenem resistance	IMP-1 group; IMP-16; IMP-2 group; IMP-7; KPC; NDM; OXA-23; OXA-40; OXA-48; OXA-58; OXA-72; VIM
Extended-spectrum beta-lactamase	CTX-M group 1; CTX-M group 2; CTX-M group 8/25; CTX-M group 9; GES; OXA-1; PER-1; PER-2; SHV; TEM; VEB
Macrolide resistance	ErmA; ErmB, mefE
Quinolone and fluoroquinolone resistance	QnrA; QnrB
Vancomycin resistance	vanA1; vanA2; vanB; vanC1; vanC2-C3-1; vanC2-C3-2
Endogenous control	16S (bacterial); GAPDH (human)
Inhibition control, exogenous	exoIPC
Species-specific genes	ACICU_00593 (Acinetobacter baumannii); femA SA (Staphylococcus aureus); femA SE (Staphylococcus epidermidis)