Table 6.
Protein name | Accession number | Figure number | Indel size | Indel position | Specificity |
---|---|---|---|---|---|
ATP-dependent helicase | WP_083036071 | Figure 9A Supplementary Figure 54 | 4aa ins | 1,144–1,184 | “Terrae” + “Triviale” Clades |
PDZ domain-containing protein | WP_083035840 | Supplementary Figure 55 | 1aa del | 290–324 | |
Ferredoxin reductase | WP_083035874 | Supplementary Figure 56 | 3aa ins | 199–263 | |
DUF2236 domain-containing protein | WP_083036515 | Supplementary Figure 57 | 4aa del | 37–80 | |
Hypothetical protein | WP_083040170 | Supplementary Figure 58 | 1aa ins | 100–141 | |
DUF4185 domain-containing protein | WP_083070918 | Supplementary Figure 59 | 3aa ins | 286–324 | |
Non-ribosomal peptide synthetasea | WP_083036306 | Supplementary Figure 60 | 1aa del | 497–532 | “Terrae” Clade |
Nucleoside hydrolasea | WP_085126548 | Supplementary Figure 61 | 2aa del | 134–174 | |
TetR/AcrR family transcriptional regulatora | WP_083037632 | Supplementary Figure 62 | 1aa del | 165–203 | |
Carbon starvation protein Aa | WP_083035732 | Supplementary Figure 63 | 4aa ins | 593–639 | |
Error-prone DNA polymerasea | WP_046686430 | Supplementary Figure 64 | 5aa ins | 98–124 | |
TetR/AcrR family transcriptional regulatora | WP_083040593 | Supplementary Figure 65 | 1aa ins | 153–192 | |
TetR family transcriptional regulatora | WP_085129961 | Supplementary Figure 66 | 1aa ins | 157–199 | |
Hypothetical proteina | WP_083037591 | Supplementary Figure 67 | 1aa del | 47–92 | |
Amidohydrolasea | WP_083037811 | Supplementary Figure 68 | 1aa del | 4–32 | |
Carboxymuconolactone decarboxylase family proteina | WP_083037652 | Supplementary Figure 69 | 1aa ins | 1–29 | |
Polyketide cyclasea | WP_085128055 | Supplementary Figure 70 | 3aa ins | 107–152 | |
Spirocyclase AveC family proteina | WP_085128375 | Supplementary Figure 71 | 1aa del | 113–242 | |
Hypothetical proteina | WP_083036336 | Supplementary Figure 72 | 3aa del | 362–404 | |
TobH proteina | WP_083035918 | Supplementary Figure 73 | 3aa ins | 37–83 | |
UDP-N-acetylmuramate–L-alanine ligase | WP_083038184 | Figure 9B Supplementary Figure 74 | 4aa ins | 131–177 | |
DUF2236 domain-containing protein | WP_085129074 | Supplementary Figure 75 | 1aa ins | 145–190 | |
Cobaltochelatase subunit CobN | WP_083037938 | Supplementary Figure 76 | 2aa ins | 209–255 | |
Alpha/beta hydrolase | WP_083040154 | Supplementary Figure 77 | 1aa ins | 232–276 | |
Potassium transporter Kef | WP_083035846 | Supplementary Figure 78 | 1aa ins | 141–180 | |
Bifunctional tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase I | WP_083040227 | Supplementary Figure 79 | 1aa del | 330–357 | |
Membrane protein | KKB98129 | Supplementary Figure 80 | 1aa del | 104–137 | |
DUF222 domain-containing protein | WP_083036231 | Supplementary Figure 81 | 5aa ins | 57–100 | |
MFS transporter | WP_083036343 | Supplementary Figure 82 | 2aa del | 232–267 | |
Adenylate/guanylate cyclase domain-containing protein | WP_083036337 | Supplementary Figure 83 | 1aa ins | 369–407 | |
DUF2029 domain-containing protein | WP_083037148 | Supplementary Figure 84 | 3aa ins | 154–187 | |
Hypothetical protein | WP_052618664 | Supplementary Figure 35 | 1aa del | 199–235 |
Homologues of M. triviale and M. koreense were absent in BLASTp searches.