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. Author manuscript; available in PMC: 2019 Mar 1.
Published in final edited form as: Proteins. 2017 Sep 11;86(Suppl 1):311–320. doi: 10.1002/prot.25376

Figure 1.

Figure 1

Outline of predictor procedure. Filled boxes indicate procedures used only by the human group. First, the target sequence(s) are input into HHPred. If a multi-chain template is found, MODELLER is used to create complex models. Otherwise, single-chain models are created with MODELLER, which are used as input to LZerD docking. The docking poses produced by LZerD are chosen using the sum of ranks of three knowledge-based scoring functions: DFIRE, GOAP, and ITScorePro. The human predictor group has two differences: first, CASP Stage 2 server models are used as input to either MODELLER or LZerD; second, literature information is used to inform docking and/or model selection.