Skip to main content
. Author manuscript; available in PMC: 2019 Mar 1.
Published in final edited form as: Proteins. 2017 Sep 11;86(Suppl 1):311–320. doi: 10.1002/prot.25376

Figure 5.

Figure 5

Human and server models for T113. Light colors: Server submission model 1. Dark colors: Human submission model 3. A: Server submission model 1 and human submission model 3 aligned using the PyMOL command “super” on chain A (dark red and light red). For the server submission, chain A was created using the template 2b5uA (11% sequence identity, model has RMSD 11.4 Å to native). For the human submission, the CASP server model Zhang-Server TS1 was used (template information not provided, model has RMSD 7.9 Å to native). The chain A models share a similar 4-strand antiparallel β sheet but in the human model, the C-terminus forms a helix (labeled CTH) behind the β sheet while in the server model, the C-terminus is in front of the β sheet. B: The server submission model 1 (incorrect: fnat 0.02, I-RMSD 12 Å, L-RMSD 31 Å). C: The human submission model 3 (acceptable: fnat 0.1, I-RMSD 3.7 Å, L-RMSD 7.3 Å). CTH: the C-terminal helix of chain A.