TABLE 3.
Strainb | Serotype | % protein identity |
||||
---|---|---|---|---|---|---|
SSU0185 | SSU1215 | SSU1355 | SSU1773 | SSU1915 | ||
SS021 | 1 | 100 | 99 | 100 | 100 | 100 |
SS045 | 1 | 100 | 100 | 100 | 100 | 100 |
SS100 | 1/2 | 100 | 100 | 100 | 100 | 100 |
SS043 | 1/2 | 98 | 99 | 99 | 98 | 100 |
SS002 | 2 | 100 | 100 | 100 | 100 | 100 |
SS008 | 2 | 98 | 99 | 99 | 98 | 100 |
SS053 | 3 | 98 | 99 | 99 | 97 | 100 |
SS084 | 3 | 98 | 99 | 99 | 97 | 100 |
SS062 | 4 | 97 | 90 | 99 | 96 | 97 |
SS079 | 4 | 88 | 43 | 75 | NPc | 85 |
SS018 | 7 | 98 | 99 | 99 | 98 | 99 |
SS024 | 7 | 98 | 99 | 99 | 98 | 99 |
SS068 | 8 | 98 | 99 | 99 | 98 | 100 |
SS091 | 8 | 98 | 99 | 99 | 97 | 100 |
SS015 | 9 | 97 | 91 | 96 | 96 | 97 |
SS088 | 9 | 97 | 90 | 96 | 96 | 97 |
SS078 | 10 | 96 | 100 | 95 | 96 | 97 |
SS063 | 14 | 100 | 100 | 100 | 100 | 100 |
SS077 | 14 | 100 | 100 | 100 | 100 | 100 |
SS097 | 16 | 98 | 98 | 97 | 97 | 98 |
SS037 | 22 | 88 | 43 | 73 | NP | 85 |
SS009 | 23 | 97 | 91 | 96 | 96 | 97 |
SS082 | 31 | 98 | 92 | 96 | 97 | 97 |
The panel contains 2 representatives (where possible) of disease-associated serotypes. Respiratory isolates were selected when no other systemic isolate was available.
Strains in bold were also used in cross-reactive ELISAs, the results of which are shown in Fig. 6.
NP, not present. If the protein had less than an 80% identity over 80% of the length, it was classified as not present.