Table 2.

Repositories and tools for aging research

Models	Description	Link/Reference
Yeast	Saccharomyces genome database	http://www.yeastgenome.org/
	Published lifespan data	http://lifespandb.sageweb.org/, McCormick et al, Cell Metabolism,2015
	Wilcoxon rank sum test to test significance of lifespan differences	http://data.kaeberleinlab.org/scripts/ranksum.php
	Yeast outgrowth data analyzer (YODA) for chronological lifespan assays	http://yoda.sageweb.org/
	Information about yeast gene deletion collection	http://www-sequence.stanford.edu/group/yeast_deletion_project/deletions3.html
	Library of histone mutants (plasmid)	(Nakanishi et al., 2008)
	Library of histone mutants (integrated)	(Dai et al., 2008)
	Screen for H3 and H4 residues affecting replicative lifespan	(Sen et al., 2015)
	Screen for yeast genes affecting replicative lifepsan	(McCormick et al., 2015)
	Screen for yeast genes affecting chronological lifespan	(Powers et al., 2006)
Worm	C. elegans information resource	https://www.wormbase.org/species/c_elegans#041--10
		http://www.wormbook.org/
	Genome-wide data in C. elegans	http://www.modencode.org/
	Published lifespan data	http://lifespandb.sageweb.org/
	Worm transcriptome data	http://spell.caltech.edu:3000/
		http://www.ncbi.nlm.nih.gov/IEB/Research/Acembly/index.html?worm
Fly	Database for Drosophila genetics and molecular biology	http://flybase.org/
		http://www.fruitfly.org/
		http://www.flymine.org/
	Genome wide data in Drosophila	http://www.modencode.org/
	Published lifespan data	http://lifespandb.sageweb.org/
Killifish	Killifish genome browser	http://africanturquoisekillifishbrowser.org/
	Published lifespan data	http://lifespandb.sageweb.org/
Normal mouse	Mouse genome information	http://www.informatics.jax.org/
	Mouse ENCODE data	http://www.mouseencode.org/data
	Published lifespan data	http://lifespandb.sageweb.org/
	Lifespan of commonly used inbred strains	https://www.jax.org/research-and-faculty/research-labs/the-harrison-lab/gerontology/available-data
Premature aging mouse models	Targeted allele detail and overall phenotype	http://www.informatics.jax.org/marker/MGI:1890508https://techtransfer.universityofcalifornia.edu/NCD/20469.html
Long-lived dwarf mouse models	Targeted allele detail and overall phenotype	http://sageke.sciencemag.org/cgi/content/full/2001/1/tg11
Cell cultures	Information about different cell types in the ENCODE project	http://genome.ucsc.edu/ENCODE/cellTypes.html
	Genome wide data on multiple cell types (ENCODE project)	https://www.encodeproject.org/
	Genome-wide epigenetic studies in human cells and tissues	http://www.roadmapepigenomics.org/
	Resource for Progeria research	http://www.progeriaresearch.org/
		https://catalog.coriell.org/
	National Institute on Aging’s (NIA) Aged Cell Bank at Coriell	https://catalog.coriell.org/