Table 2.
16S prokaryotic MOTUs detected in the gut contents of ommastrephid squids as a percentage (%) and sorted by size category.
| Kingdom | Phyllum | Class | Order | Early paralarvae (n = 25) reads (%) | Late paralarvae (n = 4) reads (%) | Subadults & adult (n = 3) reads (%) |
|---|---|---|---|---|---|---|
| Bacteria | Acidobacteria | Holophagae | Holophagales | 1.0354 | ||
| Solibacteres | Solibacterales | 1.6018 | ||||
| Actinobacteria | Actinobacteria | Actinomycetales | 2.0923 | 5.3699 | 0.5777 | |
| Rubrobacteria | Rubrobacterales | 0.2250 | 0.2582 | |||
| Bacteroidetes | Bacteroidia | Bacteroidales | 0.0005 | 0.9424 | ||
| Cytophagia | Cytophagales | 1.4985 | 2.7949 | |||
| Flavobacteriia | Flavobacteriales | 1.3095 | 0.7464 | 0.4268 | ||
| [Saprospirae] | [Saprospirales] | 2.2642 | 0.0017 | 0.3750 | ||
| Chloroflexi | Sphaerobacteridae | Sphaerobacterales | 0.1870 | |||
| Cyanobacteria | 4C0d-2 | MLE1-12 | 0.2908 | |||
| Chloroplast | N/A | 0.3389 | ||||
| Cercozoa | 0.0005 | 0.0051 | 4.1795 | |||
| Stramenopiles | 0.0020 | 0.0119 | 18.0005 | |||
| Streptophyta | 0.0010 | 0.2289 | ||||
| Synechococcophycideae | Synechococcales | 0.0039 | 0.0375 | 18.9647 | ||
| Firmicutes | Bacilli | Bacillales | 4.7189 | |||
| Lactobacillales | 0.6359 | 0.1409 | ||||
| Clostridia | Clostridiales | 2.7018 | 0.6919 | |||
| Planctomycetes | C6 | MVS-107 | 0.8316 | |||
| Phycisphaerae | Phycisphaerales | 2.8827 | ||||
| Planctomycetia | Pirellulales | 0.0034 | 2.3244 | |||
| Proteobacteria | Alphaproteobacteria | N/A | 1.5773 | 0.8862 | ||
| BD7-3 | 0.0005 | 0.6374 | 0.1713 | |||
| Caulobacterales | 5.2989 | 0.0017 | 0.6002 | |||
| Rhizobiales | 7.6903 | 5.1518 | 3.6583 | |||
| Rhodobacterales | 0.0005 | 0.0136 | 2.4391 | |||
| Rhodospirillales | 1.3247 | |||||
| Rickettsiales | 60.1709 | 0.7601 | 0.1990 | |||
| Sphingomonadales | 1.5759 | |||||
| Betaproteobacteria | Burkholderiales | 4.1440 | 0.0068 | 0.1461 | ||
| Neisseriales | 0.8959 | |||||
| Rhodocyclales | 0.2286 | |||||
| Deltaproteobacteria | Myxococcales | 0.5189 | 0.7004 | 0.3734 | ||
| Spirobacillales | 1.4712 | |||||
| Epsilonproteobacteria | Campylobacterales | 0.0017 | 0.5651 | |||
| Gammaproteobacteria | Alteromonadales | 0.5488 | 4.9660 | 6.8196 | ||
| Cardiobacteriales | 0.0005 | 0.0034 | 0.9438 | |||
| Oceanospirillales | 0.3099 | 1.7860 | 0.4667 | |||
| Pasteurellales | 0.6124 | 0.0205 | 0.7228 | |||
| Pseudomonadales | 0.4773 | 58.7110 | 0.9014 | |||
| Salinisphaerales | 4.0406 | |||||
| Vibrionales | 0.1601 | 1.4997 | 15.8191 | |||
| Thiotrichales | 1.2066 | |||||
| Xanthomonadales | 0.6271 | |||||
| Tenericutes | Mollicutes | Mycoplasmatales | 0.0029 | 0.1432 | 14.3777 | |
| [Thermi] | Deinococci | Deinococcales | 2.2206 | |||
| Verrucomicrobia | Verrucomicrobiae | Verrucomicrobiales | 0.8453 | 0.4907 | ||
| Unassigned | N/A | N/A | N/A | 0.2095 | 0.0170 | 1.1365 |
| Total reads | 204270 | 58679 | 190934 |
Taxonomic assignments are at the Order level. N/A, not applicable.