Table 1.
HCV genotype | Substitutions | Geographical variation in % of sequences variants in HCV of different genotypes | ||||
---|---|---|---|---|---|---|
Russia | Europe | Asia | USA | Total | ||
1a | nn samples | n = 29 | n = 149 | n = 27 | n = 1087 | n = 1292 |
Q70 | 3.4 | 0.7 | 0 | 1.7 | 1.5 | |
H70 | 0 | 0 | 0 | 0.1 | 0.1 | |
M91 | 0 | 0 | 0 | 0 | 0 | |
Both∗ | 0 | 0 | 0 | 0 | 0 | |
None∗∗ | 96.6 | 99.3 | 100 | 98.2 | 98.4 | |
1b | nn samples | n = 189 | n = 316 | n = 224 | n = 218 | n = 947 |
Q70 | 27.0 | 17.7 | 31.3 | 59.6 | 32.4 | |
H70 | 4.2 | 0.3 | 2.7 | 3.2 | 2.3 | |
M91 | 80.4 | 85.8 | 43.8 | 86.2 | 74.9 | |
Both∗ | 27.5 | 15.5 | 16.1 | 54.6 | 27.0 | |
None∗∗ | 15.9 | 11.7 | 38.4 | 5.5 | 17.4 | |
3a | nn samples | n = 171 | n = 28 | n = 123 | n = 38 | n = 360 |
Q70 | 2.9 | 7.1 | 9.8 | 0 | 5.3 | |
H70 | 0 | 0 | 0 | 0 | 0 | |
M91 | 0.6 | 0 | 0 | 0 | 0.3 | |
Both∗ | 0 | 0 | 0 | 0 | 0 | |
None∗∗ | 96.5 | 92.9 | 90.2 | 100 | 94.4 |
∗Substitutions in both aa 70 and 91; ∗∗no substitutions.