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. 2017 Oct 5;7(1):e00537. doi: 10.1002/mbo3.537

Figure 5.

Figure 5

Maximum likelihood tree of 43 detectable OTUs (the relative abundance >1% in at least one of the given samples) observed in rumen mucosal (RM) microbiota. The received 16S rRNA gene sequences of the corresponding OTUs were used to construct the tree. Four archeaes were used as the outgroups. Triangle indicates the OTUs observed in goats with antibiotic treatment, and the circle indicates the OTUs observed in goats without exposure to the antibiotic. Only the OTUs with significant differences (p < .05) of relative abundance are shown behind the branches. The size of the symbol indicates the relative abundance of OTUs. Red indicates a significant decrease (p < .05) in the relative abundance of the OTU in goats with antibiotic treatment. Blue indicates a significant increase (p < .05) in the relative abundance of the OTU in goats with antibiotic treatment. Only those bootstrap values greater than 60 are shown on the tree. The solid black circles at the nodes stand for a bootstrap value of 100