Table 1. Primers and positive control strains used for multiplex PCR for detection of mcr-1, mcr-2, mcr-3, mcr-4 and mcr-5 genes.
Primer name | Sequence (5’-3’) | Target gene | Size (bp) | Positive control strain | Reference |
---|---|---|---|---|---|
mcr1_320bp_fw | AGTCCGTTTGTTCTTGTGGC | mcr-1 | 320 | Escherichia coli 2012–60–1176–27 [22] | This study |
mcr1_320bp_rev | AGATCCTTGGTCTCGGCTTG | ||||
mcr2_700bp_fw | CAAGTGTGTTGGTCGCAGTT | mcr-2 | 715 | E. coli KP37 [11] | This study |
mcr2_700bp_rev | TCTAGCCCGACAAGCATACC | ||||
mcr3_900bp_fw | AAATAAAAATTGTTCCGCTTATG | mcr-3 | 929 | E. coli 2013-SQ352 | This study |
mcr3_900bp_rev | AATGGAGATCCCCGTTTTT | ||||
mcr4_1100bp_fw | TCACTTTCATCACTGCGTTG | mcr-4 | 1,116 | E. coli DH5α [13] | This study |
mcr4_1100bp_rev | TTGGTCCATGACTACCAATG | ||||
MCR5_fw | ATGCGGTTGTCTGCATTTATC | mcr-5 | 1,644 |
Salmonella 13-SA01718 [14] |
[14] |
MCR5_rev | TCATTGTGGTTGTCCTTTTCTG |