Table 1.
Primer/probe sequencea,b | Location of 5′ end | References | ||
---|---|---|---|---|
qRT-PCR | F | CARGARBCNATGTTYAGR TGGATGAG | 5003 | [13] |
R | TCGACGCCATCTTCATTCACA | 5100 | ||
P | TGGGAGGGCGATCGCAATCT | 5048 | ||
RT-PCR | F | CNTGGGAGGGCGATCGCAA | 5058 | [14] |
R | CCRCCNGCATRHCCRTTRTACAT | 5401 |
aMixed bases are as follows: Y, C or T; R, A or G; B, not A; N, any
bF, R and P represent forward primer, reverse primer and oligonucleotide capture probe, respectively