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. 2018 Feb 23;10:7. doi: 10.1186/s13099-018-0233-1

Table 8.

NoV GII strains genotyped with the capsid region of ORF2 from NoV-AGE patients in Pudong, Shanghai in 2014–2016

Genotype Accession number of strains in this study Quantity of strains Strains in phylogenetic tree
GII.1 KU672081 1 KU672081
GII.2 KU672082, KU672083, KU672087, KY797735, KY983635-49 19 KU672087, U672082, KU672083, KY983635, KY983636, KY983637, KY983641, KY983643, KY983644, KY983647, KY983649, KY797735
GII.3 KU672088-92, KU672103-109, KY797764, KY983651-79 42 KU672103, KU672106, KU672107, KU672108, KU672088, KU672089, KU672090, KU672092, KY983651, KY983653, KY983654, KY983661, KY983668, KY983670, KY983671, KY983675, KY983677, KY983679, KY797764
GII.4 KU532332, KU532354-455, KU532676, KU532705-66, KY797698-725, KY983683-832 340 KU532440, KU532363, KU532368, KU532373, KU532376, KU532384
KU532386, KU532705, KU532709, KU532734, KU532758, KU532439, KU532441, KU532448, KU532454,
KU532455, KY983692, KY983695,
KY983704, KY983719, KY983728, KY983733, KY983737, KY983742, KY983747, KY983748, KY983750, KY983765, KY983798, KY983689, KY797711
GII.5 KU672135, KY797775 2 KU672135, KY797775
GII.6 KU672136, KU672149-59, KY797777, KY983833-39 20 KU672149, KU672151, KU672153, KU672156, KU672157, KU672158, KU672159, KU672136, KY983833, KY983835, KY983836, KY983838, KY983839, KY797777
GII.8 KU672163, KU672164, KY838340 3 KU672163, KU672164, KY983840
GII.12 KU672167, KU672168 2 KU672167
GII.13 KU672193-200, KU672170-177, KY983842-57, KY797778-81 36 KU672193, KU672194, KU672197, KU672200, KU672170, KU672171, KU672172, KU672173, KU672177, KY983842, KY983843, KY983845, KY983847, KY983850, KY983851, KY983853, KY983854, KY983856, KY797778
GII.14 KU532778, KU532779, KY983858 3 KU532778, KU532779, KY983858
GII.17 KU516833-966, KU516970-93, KU672203-331, KY797681-2, KY983864-961 387 KU516882, KU516947, KU516961, KU516979, KU516980, KU516881, KU672221, KU516883, KU672240, KU516922, KU516942, KU672318, KY983864, KY983868, KY983874, KY983875, KY983876, KY983879, KY983882, KY983887, KY983896, KY983908, KY983927, KY983941, KY983951, KY983956, KY983958, KY983961, KY797685
GII.21 KU532767-76, KY983962 11 KU532767, KU532768, KU532772, KU532776, KY983962