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Number of eQTL-meQTL pairs with probability of a common causal variant (P(CCV)) > 80%, indicating likely “co-localization”, for various values of the prior p12
| Prior probability that an eSNP is an meSNP | Prior (p12) | Number of eQTL-meQTL pairs with P(CCV) > 80% | Proportiona of pairs with P(CCV) > 80% |
|---|---|---|---|
| 75% | 4.4 × 10−4 | 2913 | 54% |
| 50% | 2.9 × 10−4 | 2098 | 39% |
| 25% | 1.5 × 10−4 | 1047 | 19% |
| 10% | 5.8 × 10−5 | 473 | 9% |
| 5% | 2.9 × 10−5 | 266 | 5% |
a Total number of eQTL-meQTL pairs tested for co-localization was 5397
