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. 2018 Feb 23;6:e4374. doi: 10.7717/peerj.4374

Table 1. Mean and standard deviation of thickness calculated for each segmentation method.

Segmentation method Thickness mean (pixels) σ (pixels) Thickness mean (μm) σ (μm)
RCA.1 5.054 1.340 39.728 10.533
RCA.2 5.026 1.386 39.508 10.895
MIA-Clustering algorithm 5.111 0.952 40.176 7.484

Notes:

RCA.1 used parameters lower threshold: 7,000, upper threshold: 20,000 and minimum edge strength: 5,000; RCA.2 used lower threshold: 18,000, upper threshold: 26,000 and minimum edge strength: 20,000. Note the near identical measurements using two different sets of values. Parameters for the MIA-Clustering algorithm were grid size: 7 and probability threshold 85%.