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. 2018 Feb 21;11:919–932. doi: 10.2147/OTT.S156998

Table 1.

The screened SNV panel in Set A (father only), Set B (shared), and Set C (son only)

Set CHR Gene SIFT PPH2 Condel Label Mutation
Set A 12 SH2B3 0.01 0.887 0.436286 N P242S
5 MAP3K1 0.36 0.915 0.462039 N D806N
13 PARP4 0.32 0.002 0.52522 D A1656P
9 PTCH1 0.22 0.444 0.539701 D P1315L
2 UGT1A1 0.07 0.745 0.477712 N G71R
4 TET2 0.01 0.867 0.425092 N P29R
4 KDR 0.35 0.011 0.54766 D Q472H
Set B 2 BARD1 0.77 0.015 0.525271 D R378S
17 TP53 0.17 0.372 0.541323 D P72R
13 CUL4A 0.16 0.054 0.546327 D K644R
12 PIK3C2G 0.04 0.985 0.612421 D P952L
1 PARP1 0.05 0.783 0.421476 N K940R
1 PARP1 0.24 0.731 0.385322 N V762A
2 ALK 0.38 0.003 0.545637 D K1491R
9 JAK2 0.05 0.027 0.552008 D G127D
13 PARP4 0.12 0.999 0.359572 N A899T
17 BRCA1 0.05 0.523632 D S1634G
17 BRCA1 0.04 0.065 0.632809 D E1038G
9 TSC1 0.44 0.015 0.53961 D Q654E
Set C 17 TP53 0.17 0.372 0.541323 D P72R
16 FANCA 0.3 0.003 0.536669 D T1328A
3 BCL6 0.03 0.994 0.564365 D A2T
12 PIK3C2G 0.04 0.985 0.612421 D P952L
17 RNF43 0 0.902 0.447911 N R117H
5 FGFR4 0.04 0.803 0.52572 D G388R
13 FLT3 0.15 0.743 0.516309 N T227M
17 ERBB2 0.03 0.473 0.566675 D P1170A
20 PAK7 0 0.524865 D R335P
16 FANCA 0.11 0.349 0.598574 D A412V
5 NSD1 0.852 0.519655 N S726P
11 MEN1 0.06 0.02 0.597615 D R300Q
9 TSC1 0.44 0.015 0.53961 D Q654E

Abbreviations: PPH2, PolyPhen-2; SIFT, Sorting Intolerant from Tolerant; SNV, single nucleotide variant; CHR, chromosome.