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. Author manuscript; available in PMC: 2019 Mar 1.
Published in final edited form as: Exp Eye Res. 2018 Jan 11;168:57–68. doi: 10.1016/j.exer.2018.01.009

Table 1.

RNA-seq samples for mouse lens. The table shows SRA ID (Sequence Read Archive) for the sample, PMID (PubMed) for the study, developmental stage, read type, read length, read count, base count, and overall alignment rate using HISAT (Hierarchical Indexing for Spliced Alignment of Transcripts).

# SRA ID PMID Development Stage Read Type Read Length Read Count Base Count Overall Alignment Rate (%)
1 SRR2039769 26225632 E15 PE 100 13772390 2754478000 94
2 SRR2039770 26225632 E15 PE 100 13542500 2708500000 95
3 SRR953395 24161570 E15.5 SE 52 48552190 2524713880 94
4 SRR953394 24161570 E15.5 SE 52 47574424 2473870048 94
5 SRR953393 24161570 E15.5 SE 52 42525381 2211319812 94
6 SRR2039771 26225632 E18 PE 100 17810970 3562194000 93
7 SRR2039772 26225632 E18 PE 100 18019388 3603877600 93
8 SRR1222595 25489224 P0 SE 51 33174286 1691888586 88
9 SRR1222596 25489224 P0 SE 51 29919226 1525880526 87
10 SRR1222672 25489224 P0 SE 51 29965660 1528248660 89
11 SRR1222673 25489224 P0 SE 51 28652759 1461290709 86
12 SRR1222674 25489224 P0 SE 51 30661663 1563744813 89
13 SRR1222675 25489224 P0 SE 51 24833352 1266500952 89
14 SRR2039773 26225632 P0 PE 100 17766309 3553261800 93
15 SRR2039774 26225632 P0 PE 100 14533000 2906600000 93
16 SRR2039775 26225632 P3 PE 100 15495833 3099166600 93
17 SRR2039776 26225632 P3 PE 100 13072393 2614478600 93
18 SRR2039777 26225632 P6 PE 100 16965754 3393150800 93
19 SRR2039778 26225632 P6 PE 100 17658286 3531657200 93
20 SRR2039779 26225632 P9 PE 100 18874309 3774861800 93
21 SRR2039780 26225632 P9 PE 100 13563853 2712770600 93