Table 3:
Name | Replicons | Accession | Chr abbr. | A | ncpy | %GC | nx | m |
---|---|---|---|---|---|---|---|---|
Bacillus subtilis subsp. | 1 | NC_000964 | Bs | 0.123 | 1 | 43.51 | 14529 | 0.88 |
subtilis str. 168 | ||||||||
Escherichia coli str. | 1 | NC_000913 | K12 | 0.562 | 1 | 50.79 | 24311 | 1.34 |
K-12 substr. MG1655 | ||||||||
NC_002505 | Vc1 | 47.70 | 5909 | 0.51 | ||||
Vibrio cholerae O1 | 2 | 0.332 | 1 | |||||
NC_002506 | Vc2 | 46.91 | 1802 | 0.43 | ||||
biovar El Tor str. | ||||||||
N16961 |
A synthetic community used to demonstrate the utility of Meta3C sequencing data in resolving a microbial metagenome [17,41]. It is composed of 3 bacteria with 1 possessing 2 chromosomes. A is relative abundance, ncpy is copy number, nx is number of restriction sites, and m = nx/n0 is match quality between chromosome and enzyme choice: m < 1 is worse, m > 1 is better.