Table 3.
Human NASH vs. CTRL | Ldlr−/−.Leiden mouse HFD vs. chow | ||
---|---|---|---|
No. | Canonical Pathway | −log(p-value) | −log(p-value) |
PATHWAYS REGULATED BOTH IN HUMAN NASH AND MURINE NASH | |||
1 | Fcγ Receptor-mediated phagocytosis in macrophages and monocytes | 5.44 | 12.5 |
2 | PI3K signaling in B lymphocytes | 3.77 | 7.2 |
3 | Leukocyte extravasation signaling | 3.56 | 6.29 |
4 | IL-8 signaling | 3.05 | 9.48 |
5 | Natural killer cell signaling | 2.95 | 5.82 |
6 | Macropinocytosis signaling | 2.87 | 4.78 |
7 | B Cell receptor signaling | 2.54 | 4.89 |
8 | Role of macrophages, fibroblasts, and endothelial cells in rheumatoid arthritis | 2.53 | 5.74 |
9 | Production of nitric oxide and reactive oxygen species in macrophages | 2.36 | 7.98 |
10 | Dendritic cell maturation | 2.05 | 6.5 |
11 | iCOS-iCOSL signaling in T helper cells | 2.04 | 5.35 |
PATHWAYS REGULATED ONLY IN MURINE NASH | |||
1 | CD28 signaling in T helper cells | 1.82 | 5.51 |
2 | Crosstalk between dendritic cells and natural killer cells | 1.61 | 4.05 |
3 | T cell receptor signaling | 1.53 | 3.02 |
4 | Acute phase response signaling | 1.43 | 6.84 |
5 | PKCθ signaling in T lymphocytes | 1.43 | 4.58 |
6 | IL-10 signaling | 1.28 | 4.56 |
7 | IL-12 signaling and production in macrophages | 1.18 | 4.02 |
8 | LPS/IL-1 mediated inhibition of RXR function | 0.981 | 7.85 |
9 | Altered T cell and B cell signaling in rheumatoid arthritis | 0.833 | 5.41 |
10 | Th1 and Th2 activation pathway | 0.505 | 4.19 |
11 | NF-κB signaling | 0.375 | 5.21 |
12 | Th2 pathway | 0.26 | 3.11 |
13 | T helper cell differentiation | 0.254 | 3.57 |
14 | Toll-like receptor signaling | 0.247 | 6.11 |
15 | Inflammasome pathway | 0.242 | 3.42 |
16 | Th1 Pathway | N/A | 3.98 |
PATHWAYS REGULATED ONLY IN HUMAN NASH | |||
1 | Chemokine signaling | 2.16 | 2.44 |
2 | LPS-stimulated MAPK signaling | 2.16 | 2.99 |
Significance of enrichment for canonical pathways is indicated by –log(p-value).