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. 2018 Feb 28;8:3813. doi: 10.1038/s41598-018-22237-5

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© The Author(s) 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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ChIP-Seq coverage comparison and regulatory influences between the phoP knock-out, wild-type and phoP overexpressed strains. (A) Circle representation of the H37Rv reference genome. From outside to inside: ChIP-Seq coverage of phoP knock-out mutant, wild-type and TFOE. The inner links represent the regulatory influence of phoP derived from TFOE (blue), mutant strain (purple) and their overlap (black). (B) Detail of two selected genes with regulatory influences derived from TFOE that do not match the evidence from WT and the mutant strain.