Table 1.

Summary of next-generation sequencing results at the onset of bloodstream infection.

Patient ID	Sequence depth (reads)	Bacteria isolated from blood culture	Reads (per million reads)*	Dominant bacteria by NGS (species)**	Reads (per million reads) *
B1	9,895,348	Escherichia coli	2,575	Escherichia coli	2,575
B2	9,753,018	Capnocytophaga sputigena	0.3	Delftia sp. strain Cs1-4	179
B3	21,983,948	Streptococcus oralis/mitis	444/6	Streptococcus mitis	444
B4	32,895,328	Stenotrophomonas maltophilia	267	Stenotrophomonas maltophilia	267
B5	10,166,160	Staphylococcus aureus	7	Streptococcus pyogenes	223
B6	22,769,288	Acinetobacter ursingii †	1	Moraxella osloensis	4
B7	16,968,966	Stenotrophomonas maltophilia	1,415	Stenotrophomonas maltophilia	1,415
B8	4,793,796	Streptococcus oralis/mitis	7/3	Pseudomonas stutzeri	172
B9	24,026,704	Bacillus cereus	54	Bacillus anthracis	80
B10	20,027,612	Sphingomonas paucimobilis	25	Sphingobium sp. strain TKS	34
B11	9,305,716	Staphylococcus lugdunensis †	36	Staphylococcus epidermidis	25
B12	17,397,938	Staphylococcus epidermidis	27,719	Staphylococcus epidermidis	27,719

^*The number of the reads derived from isolated bacteria in blood culture per million reads of sequencing.

**The reads classified as Propionibacterium acnes were discarded.

^†These bacteria were classified at the genus level.