Table 1.
siRNA | Target | Sequences (duplex of synthetic RNA) |
PDI1 | rGrArU rCrUrC rArGrA rArCrC rUrUrC rUrGrC rCrUrU rCrArG rCrUrU* | |
rArGrC rUrUrC rUrCrU rGrCrC rArGrC rUrGrU rGrUrA rCrUrC rCrCrU | ||
rCrCrA rUrCrC rUrUrG rCrUrC rArGrC rUrGrG rUrArU rUrUrG rGrArG | ||
PDIA3 | rArUrC rCrUrC rArArU rGrGrC rArUrC rUrUrC rUrUrU rArUrU rGrGrA * | |
rUrGrA rGrArG rGrArA rCrUrG rArGrG rCrUrG rGrUrC rCrUrG rCrCrU | ||
rUrGrU rGrArA rGrGrA rCrGrA rArArC rArArG rGrUrG rArUrA rCrCrC | ||
PDIA4 | rCrUrC rCrUrC rUrUrC rCrUrC rGrUrC rGrUrC rGrUrC rCrUrC rCrUrC * | |
rCrArA rUrArA rArGrA rArGrA rUrGrC rCrArU rUrGrA rGrGrArU | ||
rGrGrA rGrGrA rCrGrA rCrGrA rCrGrA rGrGrA rArGrA rGrGrArG | ||
Grp78 | rUrArG rUrGrA rGrArA rCrCrA rUrGrG rCrArG rArArA rUrUrU rCrUrU * | |
rArCrU rCrArA rUrUrU rCrArA rUrUrC rUrUrG rCrUrU rGrArU rGrCrU | ||
rCrArA rGrUrG rUrUrC rCrArG rArUrC rUrCrG rGrUrU rUrCrC rGrUrC | ||
Real time qRT-PCR | Target | Sequences (5′ to 3′ DNA) |
PDI1 | FWD-TCA AGG GCA AGA TCC TGT TTA T | |
REV-CGG GCA CTC CTC TTT CTT TAG | ||
Probe-/56-FAM/TT CAT CGA C/Zen/A GCG ACC ACA CTG AC/3IABkFQ/ | ||
PDIA3 | FWD-GCC AGC AAC TTG AGG GAT AA | |
REV-GGA AGG ACG AAA CAA GGT GAT A | ||
Probe-/56-FAM/CC GGT TTG C/Zen/A CAC ACC AAT GTT GA/3IABkFQ | ||
PDIA4 | FWD-CTA ACA GCC TGA GAG AGG ATT AC | |
REV-CGT AGC TCT TGG GCT CAT ATT | ||
Probe-/56-FAM/TG CAG CCT G/Zen/A GAA ATT CCA GTC CA/3IABkFQ/ | ||
Grp78 | FWD-GTT CTT GTT GGT GGC TCT ACT | |
REV-ACA GCC TCA TCT GGG TTT ATG | ||
Probe-/56-FAM/TT TAA TGG C/Zen/A AGG AGC CAT CCC GT/3IABkFQ | ||
β-actin | FWD-GGCATCCACGAAACTACCTT | |
REV-AGCACTGTGTTGGCGTACAG | ||
Probe-/HEX-ATCATGAAGTGTGACGTGGACATCCG-TAMRA |
The listed siRNAs were confirmed to reduce both virus replication and target mRNA.