Table 1.
Sequences downloaded from GenBank (in alphabetical order) used in this study.
| Species | Order | Source | GenBank Accession Numbers |
Reference | ||
|---|---|---|---|---|---|---|
| nrLSU | nrSSU | RPB2 | ||||
| Aniptodera chesapeakensis | Microascales | ATCC 32818 | U46882 | U46870 | DQ470896 | Spatafora et al. (2006) |
| Balansia henningsiana | Hypocreales | AEG96-27a | AY489715 | AY489683 | DQ522413 | Spatafora et al. (2006) |
| Bionectria ochroleuca | Hypocreales | AFTOL-ID 187 | DQ862027 | DQ862044 | DQ862013 | Zhang et al. (2006) |
| Bombardia bombarda | Sordariales | SMH 3391 | DQ470970 | DQ471021 | DQ470923 | Spatafora et al. (2006) |
| Buergenerula spartinae | Magnaporthales | ATCC 22848 | DQ341492 | DQ341471 | – | Thongkantha et al. (2009) |
| Calosphaeria pulchella | Calosphaeriales | CBS 115999 | AY761075 | AY761071 | GU180661 | Réblová & Seifert (2004) |
| Camarops amorpha | Boliniales | SMH1450 | AY780054 | – | AY780156 | Miller & Huhndorf (2005) |
| Camarops microspora | Boliniales | CBS 649.92 | AY083821 | DQ471036 | DQ470937 | Spatafora et al. (2006) |
| Camarops tubulina | Boliniales | SMH4614 | AY346266 | – | AY780157 | Miller & Huhndorf (2005) |
| Camarops ustulinoides | Boliniales | DEH 2164 | DQ470941 | DQ470989 | DQ470882 | Spatafora et al. (2006) |
| Cercophora coprophila | Sordariales | SMH3794 | AY780058 | – | AY780162 | Miller & Huhndorf (2005) |
| Chaetosphaerella phaeostroma | Coronophorales | SMH4257 | AY695264 | – | FJ968940 | Huhndorf et al. (2004) |
| Chrysoporthe cubensis | Diaporthales | CBS 101281 | AF408338 | DQ862047 | DQ862016 | Zhang et al. (2006) |
| Cordyceps cardinalis | Hypocreales | OSC 93610 | AY184963 | AY184974 | EF469106 | Sung et al. (2007) |
| Cryphonectria parasitica | Diaporthales | ATCC 38755 | NG027589 | DQ862048 | DQ862017 | Zhang et al. (2006) |
| Cryptosporella hypodermia | Diaporthales | CBS 171.69 | DQ862028 | DQ862049 | DQ862018 | Zhang et al. (2006) |
| Diaporthe eres | Diaporthales | CBS 109767 | AF408350 | DQ471015 | DQ470919 | Spatafora et al. (2006) |
| Diatrype disciformis | Xylariales | CBS 197.49 | DQ470964 | DQ471012 | DQ470915 | Zhang et al. (2006) |
| Eutypa lata | Xylariales | CBS 208.87 | DQ836903 | DQ836896 | DQ836889 | Zhang et al. (2006) |
| Falcocladium multivesiculatum | Falcocladiales | CBS 120386 | JF831932 | JF831928 | – | Jones et al. (2014) |
| Falcocladium sphaeropedunculatum | Falcocladiales | CBS 111292 | JF831933 | JF831929 | – | Jones et al. (2014) |
| Gelasinospora tetrasperma | Sordariales | CBS 178.33 | DQ470980 | DQ471032 | DQ470932 | Spatafora et al. (2006) |
| Glomerella cingulata | Glomerellales | CBS 114054 | AF543786 | AF543762 | DQ522441 | Farr et al. (2006) |
| Gnomonia gnomon | Diaporthales | CBS 199.53 | AF408361 | DQ471019 | DQ470922 | Spatafora et al. (2006) |
| Graphium penicillioides | Microascales | CBS 506.86 | AF027384 | DQ471038 | DQ470938 | Spatafora et al. (2006) |
| Halosphaeria appendiculata | Microascales | CBS 197.60 | U46885 | U46872 | – | Zhang et al. (2006) |
| Hypocrea lutea | Hypocreales | ATCC 208838 | AF543791 | AF543768 | DQ522446 | Spatafora et al. (2007) |
| Kylindria peruamazonensis | Glomerellales | CBS 838.91 | GU180638 | GU180609 | GU180656 | Réblová et al. (2011) |
| Lasiosphaeria ovina | Sordariales | CBS958.72 | AY587946 | AY083799 | AY600286 | Miller & Huhndorf (2004) |
| Melanospora tiffanii | Melanosporales | ATCC15515 | AY015630 | AY015619 | AY015637 | Zhang & Blackwell (2002) |
| Melanospora zamiae | Melanosporales | ATCC 12340 | AY046579 | AY046578 | AY046580 | Zhang & Blackwell (2002) |
| Microascus trigonosporus | Microascales | CBS 218.31 | DQ470958 | DQ471006 | DQ470908 | Spatafora et al. (2006) |
| Monilochaetes infuscans | Glomerellales | CBS 869.96 | GU180639 | GU180620 | GU180657 | O’Connell et al. (2012) |
| Ophioceras dolichostomum | Magnaporthales | CBS 114926 | JX134689 | JX134663 | – | Luo & Zhang (2013) |
| Ophioceras leptosporum | Magnaporthales | CBS 894.70 | JX134690 | JX134664 | – | Luo & Zhang (2013) |
| Ophiocordyceps irangiensis | Hypocreales | OSC 128578 | DQ518770 | DQ522556 | DQ522445 | Spatafora et al. (2007) |
| Ophiodothella vaccinii | Phyllachorales | ATCC 36333 | – | U78777 | – | Wanderlei-Silva et al. (2003) |
| Ophiostoma piliferum | Ophiostomatales | CBS 158.74 | DQ470955 | DQ471003 | DQ470905 | Spatafora et al. (2006) |
| Ophiostoma stenoceras | Ophiostomatales | CBS 139.51 | DQ836904 | DQ836897 | DQ836891 | Zhang et al. (2006) |
| Papulosa amerospora | Cordanales | JK 5547F | DQ470950 | DQ470998 | DQ470901 | Spatafora et al. (2006) |
| Polystigma amygdalinum | Phyllachorales | EA-1 | KM111540 | KM111539 | – | Habibi et al. (2015) |
| Pseudohalonectria lignicola | Magnaporthales | M95 | JX134691 | JX134665 | – | Luo & Zhang (2013) |
| Roumegueriella rufula | Hypocreales | GJS 91-164 | EF469082 | EF469129 | EF469116 | Sung et al. (2007) |
| Sordaria fimicola | Sordariales | CBS 15.5973 | AY545728 | AY545724 | AY780194 | Zhang et al. (2006) |
| Sordaria macrospora | Sordariales | AFTOL-ID 393 | AY346301 | AY641007 | AY641074 | Huhndorf et al. (2004) |
| Sphaerodothis acrocomiae | Phyllachorales | – | – | U76340 | – | Wanderlei-Silva et al. (2003) |
| Sphaerostilbella berkeleyana | Hypocreales | CBS 102308 | U00756 | AF543770 | DQ522465 | Spatafora et al. (2007) |
| Togninia vibratilis | Togniniales | CBS 117115 | DQ649065 | – | HQ878611 | Réblová & Mostert (2007) |
| Tolypocladium capitatum | Hypocreales | OSC 71233 | AY489721 | AY489689 | DQ522421 | Spatafora et al. (2007) |
| Tolypocladium japonicum | Hypocreales | OSC 110991 | DQ518761 | DQ522547 | DQ522428 | Spatafora et al. (2007) |
| Valsa ambiens | Diaporthales | AR 3516 | AF362564 | DQ862056 | DQ862025 | Zhang et al. (2006) |
| Verticillium dahliae | Glomerellales | ATCC 16535 | DQ470945 | AY489705 | DQ522468 | Spatafora et al. (2006) |
| Xylaria acuta | Xylariales | ATCC 56487 | AY544676 | AY544719 | DQ247797 | Zhang et al. (2006) |