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. 2018 Feb 8;10(3):731–741. doi: 10.1093/gbe/evy029

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© The Author(s) 2018. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 3. — —De Bruijn graph of cold-shock proteins and clustering analysis of genomes. (a) A de Brujin graph clustering the sequences of CSPs (nodes) according to the results of the reciprocal BLASTp (edges). The comparison was conducted with the blastall package. The graph was designed in the BlastGraph program. (b) All-against-all comparison of the nucleotide genome sequences. The heat map represents the percent identity between the genomes. The tree was calculated in Gegenees software using the neighbor-joining model.