Table 2.
Percentage of Genes Distributed According to the Subsystem Category for Each Genome
| Subsystem Category | Number of Features |
|||||||
|---|---|---|---|---|---|---|---|---|
| Exiguobacteriumantarcticum B7 | E. sibiricum 255-15 | Exiguobacterium sp. MH3 | Exiguobacterium sp. U13-1 | Psychrobacter cryohalolentis K5 | P. arcticus 273-4 | P. alimentarius PAMC 27889 | P. urativorans R10.10B | |
| Cofactors, vitamins, prosthetic groups, pigments | 5.1% | 5.3% | 5% | 5% | 8.9% | 8.5% | 8.5% | 8.5% |
| Cell wall and capsule | 3.4% | 3.3% | 2.8% | 3.3% | 4.7% | 4.8% | 4.1% | 4.1% |
| Virulence, disease, and defense | 1.8% | 1.7% | 1.9% | 1.9% | 2.6% | 2.2% | 1.9% | 1.9% |
| Potassium metabolism | 0.4% | 0.4% | 0.5% | 0.5% | 0.5% | 0.6% | 0.6% | 0.6% |
| Photosynthesis | 0.1% | 0% | 0.1% | 0.09% | 0% | 0% | 0% | 0% |
| Miscellaneous | 0.9% | 0.8% | 0.9% | 0.9% | 1.1% | 0.8% | 1% | 1% |
| Phages, prophages, transposable elements, plasmids | 0.06% | 0.09% | 0.3% | 0.06% | 0% | 0.5% | 0.5% | 0.5% |
| Membrane transport | 2.6% | 0.02% | 2.9% | 2.9% | 3.1% | 2.9% | 2.4% | 2.4% |
| Iron acquisition and metabolism | 0.6% | 0.7% | 0.9% | 0.8% | 0.6% | 0.2% | 0.2% | 0.2% |
| RNA metabolism | 4.5% | 4.5% | 4.3% | 4.3% | 6.5% | 6.8% | 6.7% | 6.7% |
| Nucleosides and nucleotides | 3.9% | 3.7% | 3.6% | 3.5% | 3.5% | 5.2% | 3.3% | 3.3% |
| Protein metabolism | 6.8% | 5.8% | 7.7% | 7.5% | 9.2% | 9.5% | 8.5% | 8.5% |
| Cell division and cell cycle | 1.6% | 1.4% | 1.4% | 1.4% | 1.2% | 1.3% | 1.3% | 1.3% |
| Motility and chemotaxis | 2.5% | 2.3% | 2.3% | 2.3% | 0% | 0% | 0% | 0% |
| Regulation and cell signaling | 1.4% | 1.6% | 1.4% | 1.6% | 2.2% | 1.8% | 2.3% | 2.3% |
| Secondary metabolism | 0.1% | 0.1% | 0.1% | 0.1% | 0.1% | 0.2% | 0.2% | 0.2% |
| DNA metabolism | 2.2% | 2.3% | 2% | 2% | 3.9% | 3.7% | 3.1% | 3.1% |
| Fatty acids, lipids, and isoprenoids | 4.1% | 3.9% | 3.9% | 3.9% | 5.3% | 5.3% | 4.7% | 4.7% |
| Nitrogen metabolism | 0.4% | 0.5% | 0.4% | 0.4% | 0.6% | 0.9% | 0.6% | 0.6% |
| Dormancy and sporulation | 0.4% | 0.4% | 0.4% | 0.4% | 0.07% | 0% | 0.1% | 0.1% |
| Respiration | 1.6% | 1.8% | 1.5% | 1.5% | 4.2% | 4.0% | 4.2% | 4.2% |
| Stress response | 2.8% | 2.8% | 2.6% | 2.6% | 3.6% | 3.5% | 3.4% | 3.4% |
| Metabolism of aromatic compounds | 0.1% | 0.1% | 0.2% | 0.2% | 1.0% | 0.3% | 0.2% | 0.2% |
| Amino acids and derivatives | 10.3% | 9.8% | 8.8% | 8.8% | 13.4% | 11.1% | 12.4% | 12.4% |
| Sulfur metabolism | 0.3% | 0.3% | 0.3% | 0.3% | 0.8% | 0.9% | 0.9% | 0.9% |
| Phosphorous metabolism | 1.4% | 1.2% | 1.1% | 1.1% | 1.1% | 1.1% | 1.3% | 1.3% |
| Carbohydrates | 9.2% | 10.5% | 10.6% | 10.5% | 8.1% | 8.1% | 6.7% | 6.7% |
Note.—Only the names of the strains are presented in the table. Percentage was calculated taking into consideration the total number of CDSs predicted by RAST server.