In wild type yeast, the Mediator complex acts at both the Ty1 and Ty1i proximal promoters, stimulating robust transcription of Ty1 and a small amount of Ty1i expression that is sufficient to restrict mobility. Deletion of subunits from the tail module triad increases Mediator activity at the Ty1i promoter, thus increasing Ty1i production and reducing retromobility. Conversely, when a subunit from the head module is deleted, the association between Mediator and the Ty1i promoter is perturbed, permitting increases in retromobility. Finally, when the SAGA-dependent Ty1 promoter is swapped for the strong, TFIID-dependent TEF1 promoter, the complex preferentially associates with the Ty1 promoter, irrespective of the influence of the tail module.