Table 3.
Description of CBF genes used in the study
| Proposed gene name | Gene name | Gene accession | Protein accession | Gene fragment | Protein fragment | Species | References |
|---|---|---|---|---|---|---|---|
| TaCBFIVd-4A | TaCBFIVd-4A | KY931522 | 672 | 223 | Triticum aestivum | This study | |
| AeuCBFIVd-4 | AeuCBFIVd-4 | KY931528 | 672 | 223 | Aegilops umbellulata | This study | |
| AetCBFIVd-4 | AetCBFIVd-4 | KY931534 | 672 | 223 | Aegilops tauschii | This study | |
| AesCBFIVd-4 | AesCBFIVd-4 | KY931540 | 672 | 223 | Aegilops speltoides | This study | |
| AenCBFIVd-4 | AenCBFIVd-4 | KY931546 | 678 | 225 | Aegilops neglecta | This study | |
| TaCBFIVd-9D | TaCBFIVd-9D | KY931521 | 810 | 269 | Triticum aestivum | This study | |
| AeuCBFIVd-9 | AeuCBFIVd-9 | KY931527 | 765 | 254 | Aegilops umbellulata | This study | |
| AetCBFIVd-9 | AetCBFIVd-9 | KY931533 | 765 | 254 | Aegilops tauschii | This study | |
| AesCBFIVd-9 | AesCBFIVd-9 | KY931539 | 765 | 254 | Aegilops speltoides | This study | |
| AenCBFIVd-9 | AenCBFIVd-9 | KY931545 | 765 | 254 | Aegilops neglecta | This study | |
| AebCBFIVd-4 | AebCBF7 | FR719739 | CBX87021 | 555 | 184 | Aegilops biuncialis | Unpublished, 2010 |
| AebCBFIVd-9 | AebCBF9 | FR719741 | CBX87023 | 768 | 255 | Aegilops biuncialis | Unpublished, 2010 |
| AebCBFIIIa-6 | AebCBF1 | FR719733 | CBX87015 | 729 | 242 | Aegilops biuncialis | Unpublished, 2010 |
| AebCBFIIIc-3 | AebCBF2 | FR719734 | CBX87016 | 741 | 246 | Aegilops biuncialis | Unpublished, 2010 |
| AebCBFIIIc-10 | AebCBF3 | FR719735 | CBX87017 | 714 | 237 | Aegilops biuncialis | Unpublished, 2010 |
| AebCBFIIId-12 | AebCBF4 | FR719736 | CBX87018 | 720 | 239 | Aegilops biuncialis | Unpublished, 2010 |
| AebCBFIIId-19 | AebCBF5 | FR719737 | CBX87019 | 711 | 236 | Aegilops biuncialis | Unpublished, 2010 |
| AebCBFIVa-2 | AebCBF6 | FR719738 | CBX87020 | 678 | 225 | Aegilops biuncialis | Unpublished, 2010 |
| AebCBFIVd-22 | AebCBF8 | FR719740 | CBX87022 | 855 | 284 | Aegilops biuncialis | Unpublished, 2010 |
| AtCBFV-1 | AtCBF1 | U77378 | AAC49662 | 642 | 213 | Arabidopsis thaliana (thale cress) | Stockinger et al. (1997) |
| AtCBFV-2 | AtCBF2 | AF074601 | AAD15976 | 651 | 216 | Arabidopsis thaliana (thale cress) | Gilmour et al. (1998) |
| AtCBFV-3 | AtCBF3 | AF074602 | AAD15977 | 651 | 216 | Arabidopsis thaliana (thale cress) | Gilmour et al. (1998) |
| BdCBFIIId-1 | BdCBF1 | JQ180470 | AFD96407 | 735 | 244 | Brachypodium distachyon (stiff brome) | Li et al. (2012) |
| BdCBFIIId-2 | BdCBF2 | JQ180470 | AFD96408 | 777 | 258 | Brachypodium distachyon (stiff brome) | Li et al. (2012) |
| BdCBFIIId-3 | BdCBF3 | JQ180470 | AFD96409 | 753 | 250 | Brachypodium distachyon (stiff brome) | Li et al. (2012) |
| BdCBFIIId-4 | BdCBF4 | JQ180470 | AFD96410 | 747 | 248 | Brachypodium distachyon (stiff brome) | Li et al. (2012) |
| HvCBFIa-1 | HvCBF1 | AF418204 | AAL84170 | 654 | 217 | Hordeum vulgare subsp. vulgare (domesticated barley) | Xue (2002) |
| HvCBFIVa-2 | HvCBF2 | AF442489 | AAM13419 | 666 | 221 | Hordeum vulgare subsp. vulgare (domesticated barley) | Xue (2003) |
| HvCBFIIIc-3 | HvCBF3 | AF239616 | AAG59618 | 750 | 249 | Hordeum vulgare subsp. vulgare (domesticated barley) | Choi et al. (2002) |
| HvCBFIVd-4 | HvCBF4B | AY785848 | AAX28948 | 678 | 225 | Hordeum vulgare subsp. vulgare (domesticated barley) | Skinner et al. (2006) |
| HvCBFII-5 | HvCBF5 | AY785857 | AAX23700 | 645 | 214 | Hordeum vulgare subsp. vulgare (domesticated barley) | Skinner et al. (2006) |
| HvCBFIIIa-6 | HvCBF6 | EU331996 | ACA29480 | 735 | 244 | Hordeum vulgare subsp. vulgare (domesticated barley) | 251 |
| HvCBFV-7 | HvCBF7 | AY785866 | AAX23706 | 660 | 219 | Hordeum vulgare subsp. vulgare (domesticated barley) | Skinner et al. (2006) |
| HvCBFIVd-9 | HvCBF9 | AY785880 | AAX23709 | 876 | 291 | Hordeum vulgare subsp. vulgare (domesticated barley) | Skinner et al. (2006) |
| HvCBFIIIc-10A | HvCBF10A | AY785884 | AAX23713 | 684 | 227 | Hordeum vulgare subsp. vulgare (domesticated barley) | Skinner et al. (2006) |
| HvCBFIIIc-10B | HvCBF10B | AY785887 | AAX23716 | 723 | 240 | Hordeum vulgare subsp. vulgare (domesticated barley) | Skinner et al. (2006) |
| HvCBFIa-11 | HvCBF11 | AY785892 | AAX23720 | 657 | 218 | Hordeum vulgare subsp. vulgare (domesticated barley) | Skinner et al. (2006) |
| HvCBFIIId-12 | HvCBF12 | DQ095157 | ABA01491 | 735 | 244 | Hordeum vulgare subsp. vulgare (domesticated barley) | Skinner et al. (2005) |
| HvCBFIIIc-13 | HvCBF13 | DQ095158 | ABA01492 | 759 | 252 | Hordeum vulgare subsp. vulgare (domesticated barley) | Skinner et al. (2005) |
| HvCBFIVc-14 | HvCBF14 | DQ095159 | ABA01493 | 645 | 214 | Hordeum vulgare subsp. vulgare (domesticated barley) | Skinner et al. (2005) |
| ScCBFIa-11 | ScCBFIa-11 | EU194240 | ABY59777 | 615 | 204 | Secale cereale (rye) | Campoli et al. (2009) |
| ScCBFII-5 | ScCBFII-5 | EU194241 | ABY59778 | 642 | 213 | Secale cereale (rye) | Campoli et al. (2009) |
| ScCBFIIIa-6 | ScCBFIIIa-6 | EU194242 | ABY59779 | 690 | 229 | Secale cereale (rye) | Campoli et al. (2009) |
| ScCBFIIIc-10 | ScCBFIIIc-10 | EU194243 | ABY59780 | 666 | 221 | Secale cereale (rye) | Campoli et al. (2009) |
| ScCBFIIIc-3A | ScCBFIIIc-3A | EU194244 | ABY59781 | 687 | 228 | Secale cereale (rye) | Campoli et al. (2009) |
| ScCBFIIIc-3B | ScCBFIIIc-3B | EU194245 | ABY59782 | 696 | 231 | Secale cereale (rye) | Campoli et al. (2009) |
| ScCBFIIId-12 | ScCBFIIId-12 | EU194246 | ABY59783 | 699 | 232 | Secale cereale (rye) | Campoli et al. (2009) |
| ScCBFIIId-15 | ScCBFIIId-15 | EU194247 | ABY59784 | 663 | 220 | Secale cereale (rye) | Campoli et al. (2009) |
| ScCBFIIId-19 | ScCBFIIId-19 | EU194248 | ABY59785 | 666 | 221 | Secale cereale (rye) | Campoli et al. (2009) |
| ScCBFIVa-2A | ScCBFIVa-2A | EU194249 | ABY59786 | 582 | 193 | Secale cereale (rye) | Campoli et al. (2009) |
| ScCBFIVa-2B | ScCBFIVa-2B | EU194250 | ABY59787 | 582 | 193 | Secale cereale (rye) | Campoli et al. (2009) |
| TaCBFIa-11 | TaCBFIa-A11 | EF028751 | ABK55354 | 657 | 218 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFII-5A | TaCBFII-5.1 | EF028752 | ABK55355 | 648 | 215 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFII-5B | TaCBFII-5.2 | EF028753 | ABK55356 | 660 | 219 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFII-5C | TaCBFII-5.3 | EF028754 | ABK55357 | 657 | 218 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIIIa-6B | TaCBFIIIa-6.1 | EF028755 | ABK55358 | 711 | 236 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIIIa-6C | TaCBFIIIa-6.2 | EF028756 | ABK55359 | 729 | 242 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIIIa-6A | TaCBFIIIa-D6 | EF028757 | ABK55360 | 717 | 238 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIIIc-3B | TaCBFIIIc-3.1 | EF028758 | ABK55361 | 708 | 235 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIIIc-3C | TaCBFIIIc-3.2 | EF028759 | ABK55362 | 741 | 246 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIIIc-10 | TaCBFIIIc-B10 | EF028761 | ABK55364 | 723 | 240 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIIIc-3A | TaCBFIIIc-D3 | EF028760 | ABK55363 | 738 | 245 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIIId-12B | TaCBFIIId-12.1 | EF028762 | ABK55365 | 738 | 245 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIIId-15B | TaCBFIIId-15.2 | EF028765 | ABK55368 | 726 | 241 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIIId-15A | TaCBFIIId-A15 | EF028764 | ABK55367 | 720 | 239 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIIId-19B | TaCBFIIId-A19 | EF028766 | ABK55369 | 705 | 234 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIIId-12A | TaCBFIIId-B12 | EF028763 | ABK55366 | 738 | 245 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIIId-19C | TaCBFIIId-B19 | EF028767 | ABK55370 | 705 | 234 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIIId-19A | TaCBFIIId-D19 | EF028768 | ABK55371 | 705 | 234 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVa-2C | TaCBFIVa-2.2 | EF028770 | ABK55373 | 693 | 230 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVa-2A | TaCBFIVa-2.3 | EF028771 | ABK55374 | 579 | 192 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVa-2B | TaCBFIVa-A2 | EF028769 | ABK55372 | 678 | 225 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVb-21A | TaCBFIVb-21.1 | EF028775 | ABK55378 | 609 | 202 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVb-20A | TaCBFIVb-A20 | EF028772 | ABK55375 | 654 | 217 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVb-20B | TaCBFIVb-B20 | EF028773 | ABK55376 | 639 | 212 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVb-20C | TaCBFIVb-D20 | EF028774 | ABK55377 | 639 | 212 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVb-21B | TaCBFIVb-D21 | EF028776 | ABK55379 | 609 | 202 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVc-14C | TaCBFIVc-14.1 | EF028777 | ABK55380 | 639 | 212 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVc-14A | TaCBFIVc-14.3 | EF028779 | ABK55382 | 645 | 214 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVc-14 B | TaCBFIVc-B14 | EF028778 | ABK55381 | 645 | 214 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVd-4C | TaCBFIVd-4.1 | EF028780 | ABK55383 | 669 | 222 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVd-9B | TaCBFIVd-9.1 | EF028782 | ABK55385 | 810 | 269 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVd-22 A | TaCBFIVd-A22 | EF028785 | ABK55388 | 828 | 275 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVd-22 B | TaCBFIVd-B22 | EF028786 | ABK55389 | 873 | 290 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVd-4B | TaCBFIVd-B4 | EF028781 | ABK55384 | 669 | 222 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVd-9A | TaCBFIVd-B9 | EF028783 | ABK55386 | 810 | 269 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVd-22 C | TaCBFIVd-D22 | EF028787 | ABK55390 | 828 | 275 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TaCBFIVd-9C | TaCBFIVd-D9 | EF028784 | ABK55387 | 810 | 269 | Triticum aestivum (bread wheat) | Badawi et al. (2007) |
| TmCBFIIIc-3 | TmCBF3 | AY951949 | AAY32553 | 741 | 246 | Triticum monococcum | Miller et al. (2006) |
| TmCBFII-5 | TmCBF5 | AY951947 | AAY32551 | 633 | 210 | Triticum monococcum | Miller et al. (2006) |
| TmCBFV-7 | TmCBF7 | AY785904 | AAX28965 | 828 | 275 | Triticum monococcum | Skinner et al. (2005) |
| TmCBFIIIc-10 | TmCBF10 | AY951950 | AAY32554 | 720 | 239 | Triticum monococcum | Miller et al. (2006) |
| TmCBFIIId-12 | TmCBF12 | EU076381 | ABW87011 | 744 | 247 | Triticum monococcum | Knox et al. (2008) |
| TmCBFIIIc-13 | TmCBF13 | AY951951 | AAY32555 | 720 | 239 | Triticum monococcum | Miller et al. (2006) |
| TmCBFIVc-14A | TmCBF14 | EU076382 | ABW87012 | 639 | 212 | Triticum monococcum | Knox et al. (2008) |
| TmCBFIVc-14B | TmCBF14 | AY951948 | AAY32552 | 639 | 212 | Triticum monococcum | Miller et al. (2006) |
| TmCBFIIId-15 | TmCBF15 | EU076383 | ABW87013 | 726 | 241 | Triticum monococcum | Knox et al. (2008) |
| TmCBFIIId-16 | TmCBF16 | EU076384 | ABW87014 | 864 | 287 | Triticum monococcum | Knox et al. (2008) |
| TmCBFIIIb-18 | TmCBF18 | AY951946 | AAY32550 | 738 | 245 | Triticum monococcum | Miller et al. (2006) |