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. 2018 Feb 27;8:39. doi: 10.3389/fcimb.2018.00039

Table 1.

Statistics of RNA-Seq data.

FDR > 5% FDR < 5%
up up FC2 down down FC2
BWE vs. LB pH 7.0 1111 2298 999 2139 743
(18.0%) (13.4%)
BWE vs. LB pH 9.0 1360 2126 864 2062 557
(15.6%) (10.0%)
LB pH 9.0 vs. pH 7.0 2300 1677 232 1571 297
(4.2%) (5.4%)

Significant differentially expressed genes with false discovery rate (FDR) smaller than 5% and number of genes, which have a fold change (FC) 2 threshold. Both differentially up-regulated (up) and down-regulated (down) genes are indicated in the Table. The RNA-Seq analysis was performed on the full P. aeruginosa transcriptome (5548 transcripts) available.