Table 3.
Check the Expression quantitative trait loci (eQTLs) annotation in one large dataset for rs940187 and rs1511412
| Rs_ID | Trans_Chr | Trans_Gene_Symbol | log10(P) | Effect | r2 |
|---|---|---|---|---|---|
| rs940187 | 12 | LEMD3 | -4.4866 | -0.009 | 0.0033 |
| rs940187 | 6 | SLC7A9 | -4.0502 | 0.0082 | 0.0029 |
| rs1511412 | 11 | HARBI1 | -4.8035 | -0.0266 | 0.0036 |
| rs1511412 | 5 | ZRSR2 | -4.2142 | 0.04 | 0.0031 |
| rs1511412 | 12 | GTF2H3 | -4.033 | -0.0258 | 0.0029 |
Rs_ID, Identifier of the marker in the current version of dbSNP; Transcript_Chr, The chromosome on which the gene encoding the transcript (whose expression is regulated) is located; Transcript_Gene_Symbol, The alphanumeric gene symbol representing the gene whose expression varies; log10(P), the log base 10 of the P value for the T test statistic; Effect, the fraction of variance explained by the SNP; r2, the correlation of the gene expression fit.