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. 2018 Jan 9;293(9):3236–3251. doi: 10.1074/jbc.RA117.001013

Table 3.

Data collection and refinement statistics for DRB1*04:04/*04:05 in complex with self-antigens

Statistics for the highest-resolution shell are shown in parentheses. r.m.s.d. means root mean square deviation.

DR0404_LL37_Cit91, PDB code 6BIX DR0404_His2B, PDB code 6BIY DR0404_His2Bcit, PDB code 6BIZ DR0405_Vim424Cit, PDB code 6BIR
Data collection
    Resolution range 39.22–2.20 (2.279–2.20) 39.22–2.05 (2.12–2.05) 39.09–2.10 (2.18–2.10) 39.34–2.3 (2.38–2.30)
    Space group C 2 2 21 C 2 2 21 C 2 2 21 C 2 2 21
    Unit cell a, b, c (Å) 67.34, 183.06, 78.43 67.83, 182.48, 76.81 68.19, 182.60, 76.84 67.46, 183.01, 77.08
    Unit cell α, β, γ (°) 90, 90, 90 90, 90, 90 90, 90, 90 90, 90, 90
    Total reflections 50,100 (4930) 59,256 (5892) 56,781 (5590) 42,840 (4064)
    Unique reflections 25,066 (2466) 30,214 (2983) 28,423 (2799) 21,517 (2081)
    Multiplicity 5.5 (5.6) 4.4 (4.5) 7.2 (6.8) 6.8 (6.3)
    Completeness (%) 100.00 (100.00) 99.51 (99.93) 100.00 (100.00) 99.31 (97.61)
    Mean I/σ(I) 8.58 (4.27) 10.20 (2.73) 18.75 (5.06) 9.45 (2.49)
    R-merge 0.03499 (0.1193) 0.05276 (0.2877) 0.03453 (0.191) 0.05655 (0.2767)
    CC1/2 0.997 (0.954) 0.989 (0.739) 0.998 (0.88) 0.995 (0.817)
    Wilson B-factor 19.6 24.92 24.07 25.56

Refinement
    Reflections used in refinement 25,064 (2466) 30,210 (2983) 28,422 (2799) 21,511 (2081)
    Reflections used for R-free 1275 (112) 1536 (131) 1416 (155) 1102 (100)
    R-work 0.1692 (0.1749) 0.1825 (0.2410) 0.1856 (0.2404) 0.1858 (0.2347)
    R-free 0.2130 (0.2634) 0.2319 (0.2786) 0.2284 (0.3165) 0.2380 (0.2502)
    r.m.s.d. (bonds) 0.007 0.007 0.008 0.007
    r.m.s.d (angles) 0.98 0.86 0.92 0.96
    Ramachandran favored (%) 98 97.59 98 96.71
    Ramachandran allowed (%) 1.9 2.41 1.9 3.29
    Ramachandran outliers (%) 0 0 0 0
    Average B-factor 22.41 28.64 26.16 25.6
        Macromolecules 21.81 27.95 25.58 25.3
        Ligands 36.68 44.58 40.05 43.44
        Solvent 27.41 33.98 29.92 27.03