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. 2017 Dec 15;7(2):gix128. doi: 10.1093/gigascience/gix128

Table 1:

DNA reads produced for L. fortunei genome assembly

Library technology Raw data Trimmed data*
Reads insert size Pairs Number of reads Number of bases Number of reads Number of bases
Illumina Nextera Paired-end – 180 bp R1 209 542 721 21 060 365 702 209 036 571 21 001 101 404
R2 209 542 721 21 049 308 698 209 036 571 20 991 650 008
Paired-end – 500 bp R1 153 948 902 15 472 966 961 153 482 290 15 423 123 500
R2 153 948 902 15 462 883 157 153 482 290 15 414 813 589
Mate-paired 3 – 12 Kb R1 178 392 944 18 017 687 344 58 157 933 5 822 572 152
R2 178 392 944 18 017 687 344 58 157 933 5 811 310 412
Pacific Biosciences P4C – 10/SMTRC Subreads 1 663 730 11 171 487 485

*Trimmomatic parameters for Illumina reads—ILLUMINACLIP: NexteraPE-PE.fa:2:30:10 SLIDINGWINDOW:4:2 LEADING:10 TRAILING:10 CROP:101 HEADCROP:0 MINLEN:80.