Table 1.
Analyzed articles, SRA Ids, tissue, Read count, and alignment information.
| Article | SRR ID | Original sample name | Sample tissue | Given sample name | Total reads | Alignment % |
|---|---|---|---|---|---|---|
| Martinelli et al., 2013 | SRR867442, SRR867443 | ML+AH | Mature leaves | Control-A | 682,63,920 | 81.69 |
| SRR867449 | ML+SY | Infected-A | 625,03,214 | 72.95 | ||
| SRR867426 | YL+AH | Young leaves | Control-B | 641,86,912 | 82.29 | |
| SRR867431 | YL+SY | Infected-B | 462,96,354 | 81.20 | ||
| Fu et al., 2016 | SRR3032893 | Healthy(H) | Young leaves | Control-C | 85,23,448 | 86.76 |
| SRR3032892 | CaLas-B232 | Infected-C | 945,69,124 | 86.87 | ||
| Wang et al., 2016 | SRR2224205 | R19T23 | Young leaves | Susceptible | 1061,89,916 | 78.84 |
| SRR2224296 | R19T24 | 1183,00,964 | 75.65 | |||
| SRR2224411 | R20T24 | 1018,35,958 | 75.13 | |||
| SRR2224421 | R20T17 | Tolerant | 1128,32,326 | 73.42 | ||
| SRR2224429 | R19T17 | 724,91,540 | 82.44 | |||
| SRR2224406 | R20T18 | 1024,57,842 | 77.78 |