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. 2018 Mar 5;19:84. doi: 10.1186/s12859-018-2079-4

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© The Author(s). 2018

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 4 — Performance of basic and advanced text mining protocols. Advanced filtering of the residues in the abstracts retrieved by the OR-queries was performed by different methods of analysis of the sentence parse trees (for method description see first column in Table 4) The TM performance was calculated using Eq. (1). The distribution is normalized to the total number of complexes for which residues were extracted (second column in Table 4)