Table 4.
Putative core and accessory effectors identified among 36 C. cassiicola isolates.
| Effector categories | CCP total effectors | Accessory effectors | ||||
|---|---|---|---|---|---|---|
| Total | Secreted | Not secreted | Total | Secreted | Not secreted | |
| Nbr (% of CCP) | Nbr (% of CCP) | Nbr (% of CCP) | ||||
| Secondary metabolism | 63 | 63 | 24 (38.1) | 24 (38.1) | ||
| Cazymes | 1,152 | 326 | 826 | 195 (16.9) | 45 (13.8) | 150 (18.2) |
| Lipases | 104 | 40 | 64 | 24 (3.9) | 5 (12.5) | 19 (29.7) |
| Peptidases | 630 | 124 | 506 | 135 (22.1) | 23 (18.5) | 112 (22.1) |
| Other LSPs | 411 | 411 | 108 (26.3) | 108 (26.3) | ||
| Other SSPs | 510 | 510 | 126 (24.7) | 126 (24.7) | ||
| Total | 2,870 | 1,411 | 1,459 | 612 (21.3) | 307 (21.8) | 305 (20.9) |
Accessory effectors are effectors either absent or varying in copy number in at least one isolate, as opposed to the core effectors, found in exactly one copy in each of the 36 isolates. Only conventional ER/Golgi-dependent secretion was considered; LSP (large secreted proteins, >300 amino acids), SSP (small secreted proteins, <300 amino acids).