Table 2.
Distribution of the cells collected from Day 2 and Day 3 bovine embryos through the clusters identified by the SC3 tool.
| Embryo designation | K1 | K2 | K3 | K4 | K5 | K6 | No. cells not analyzed | No. embryo cells |
|---|---|---|---|---|---|---|---|---|
| Day2-E1 | 4 | — | — | — | — | 2 | 2 | 8 |
| Day2-E2 | 9 | — | — | — | — | — | — | 9 |
| Day2-E3 | 7 | — | — | — | — | — | 2 | 9 |
| Day2-E4 | 6 | — | — | — | — | 1 | 1 | 8 |
| Day2-E5 | 7 | — | — | — | 1 | — | — | 8 |
| Day2-E6 | 6 | — | — | — | — | — | — | 6 |
| Day3-E1 | 13 | — | — | — | — | 1 | 1 | 15 |
| Day3-E2 | 14 | — | — | — | — | — | 2 | 16 |
| Day3-E3 | 2 | — | — | — | 13 | 1 | — | 16 |
| Day3-E4 | — | — | — | 11 | — | 2 | — | 13 |
| Day3-E5 | — | 6 | 9 | — | — | 2 | — | 17 |
| Day3-E6 | — | 13 | 1 | — | — | — | — | 14 |
| Day3-E7 | — | 11 | — | 3 | — | 1 | 1 | 16 |
| Day3-E8 | — | — | — | 14 | — | 1 | 1 | 16 |
The original number of cells in each embryo is reported in the last column. Some cells were lost at the time of collection or filtered out because of low quality of their transcriptome; the number of these cells is reported in the penultimate column.