Skip to main content
. 2018 Mar 8;13(3):e0194059. doi: 10.1371/journal.pone.0194059

Table 3. Genetic diversity measures of 17 microsatellite markers in 69 Fan-tailed Gerygone nestlings and the results of association analysis performed in CLUMP 2.4 with skin coloration of the offspring.

HE: unbiased expected heterozygosity; HO: observed heterozygosity; p: level of significance of the chi-squared value from the table obtained by comparing χ2 of the allele frequencies in dark and bright chicks with χ2 calculated based on simulated (100x) tables with the same row and column totals, after collapsing low allele frequencies (<5%, [45]). Significant results (loci associated with skin coloration) after Bonferroni correction (adjusted P < 0.003) are marked with asterisk.

Marker HO HE p
loc1 0.86 0.72 0.003
loc2 0.87 0.72 0.000*
loc3 0.77 0.63 0.002*
loc4 0.48 0.41 0.304
loc5 0.79 0.64 0.101
loc6 0.77 0.59 0.001*
loc7 0.85 0.65 0.003
loc8 0.52 0.42 0.002*
loc9 0.68 0.57 0.010
loc10 0.54 0.46 0.128
loc11 0.85 0.69 0.001*
loc12 0.72 0.60 0.006
loc13 0.80 0.65 0.000*
loc14 0.32 0.27 0.212
loc15 0.80 0.66 0.000*
loc16 0.24 0.20 0.017
loc17 0.84 0.74 0.009