Table 2. GO categories enriched among genes with NSY SNPs and scored by PROVEAN as severe mutations.
R. mackenziei Strain | GO Category | Term | P-Value | Top Five PFAM Domains |
---|---|---|---|---|
IHM 22877 | GO:0016491 | Oxidoreductase activity | 1.74E−08 | PF00106, PF00107, PF08240, PF01266, PF00171 |
GO:0055114 | Oxidation-reduction process | 3.00E−08 | PF00067, PF08240, PF00107, PF01266, PF00732 | |
GO:0042623 | ATPase activity, coupled | 5.30E−08 | ||
GO:0016887 | ATPase activity | 7.13E−08 | PF00005 | |
GO:0015399 | Primary active transmembrane transporter activity | 7.90E−07 | ||
GO:0015405 | P-P-bond-hydrolysis-driven transmembrane transporter activity | 7.90E−07 | ||
GO:0043492 | ATPase activity, coupled to movement of substances | 1.37E−06 | ||
GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | 2.08E−06 | PF00664, PF06422 | |
GO:0016462 | Pyrophosphatase activity | 2.43E−06 | ||
GO:0016818 | Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 4.52E−06 | ||
GO:0016820 | Hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 4.57E−06 | ||
GO:0017111 | Nucleoside-triphosphatase activity | 5.58E−06 | ||
GO:0016817 | Hydrolase activity, acting on acid anhydrides | 9.17E−06 | ||
GO:0003824 | Catalytic activity | 2.29E−05 | PF00501, PF01048, PF02515, PF00128, PF01557 | |
GO:0022804 | Active transmembrane transporter activity | 5.85E−05 | ||
GO:0046906 | Tetrapyrrole binding | 1.30E−04 | ||
GO:0020037 | Heme binding | 1.30E−04 | PF00067, PF01077, PF00199 | |
GO:0016705 | Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.59E−04 | PF00067 | |
dH24460 | GO:0016491 | Oxidoreductase activity | 3.11E−07 | PF00106, PF00107, PF08240, PF02668, PF01565 |
GO:0055114 | Oxidation–reduction process | 1.45E−06 | PF00067, PF08240, PF00107, PF02668, PF00732 | |
GO:0016705 | Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 9.97E−06 | PF00067 | |
GO:0005506 | Iron ion binding | 4.32E−05 | PF00067, PF10637, PF00848 |
GO, gene ontology; PFAM, protein family database.