Skip to main content
. 2018 Jan 11;8(3):909–922. doi: 10.1534/g3.117.300421

Table 2. GO categories enriched among genes with NSY SNPs and scored by PROVEAN as severe mutations.

R. mackenziei Strain GO Category Term P-Value Top Five PFAM Domains
IHM 22877 GO:0016491 Oxidoreductase activity 1.74E−08 PF00106, PF00107, PF08240, PF01266, PF00171
GO:0055114 Oxidation-reduction process 3.00E−08 PF00067, PF08240, PF00107, PF01266, PF00732
GO:0042623 ATPase activity, coupled 5.30E−08
GO:0016887 ATPase activity 7.13E−08 PF00005
GO:0015399 Primary active transmembrane transporter activity 7.90E−07
GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity 7.90E−07
GO:0043492 ATPase activity, coupled to movement of substances 1.37E−06
GO:0042626 ATPase activity, coupled to transmembrane movement of substances 2.08E−06 PF00664, PF06422
GO:0016462 Pyrophosphatase activity 2.43E−06
GO:0016818 Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 4.52E−06
GO:0016820 Hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 4.57E−06
GO:0017111 Nucleoside-triphosphatase activity 5.58E−06
GO:0016817 Hydrolase activity, acting on acid anhydrides 9.17E−06
GO:0003824 Catalytic activity 2.29E−05 PF00501, PF01048, PF02515, PF00128, PF01557
GO:0022804 Active transmembrane transporter activity 5.85E−05
GO:0046906 Tetrapyrrole binding 1.30E−04
GO:0020037 Heme binding 1.30E−04 PF00067, PF01077, PF00199
GO:0016705 Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 1.59E−04 PF00067
dH24460 GO:0016491 Oxidoreductase activity 3.11E−07 PF00106, PF00107, PF08240, PF02668, PF01565
GO:0055114 Oxidation–reduction process 1.45E−06 PF00067, PF08240, PF00107, PF02668, PF00732
GO:0016705 Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 9.97E−06 PF00067
GO:0005506 Iron ion binding 4.32E−05 PF00067, PF10637, PF00848

GO, gene ontology; PFAM, protein family database.