Table 1.
Reference | Amplicon size (bp) |
Primer | Sequence (5′–3′) | Target gene | |
---|---|---|---|---|---|
22 | 169 | aac(3)-I -F | ACCTACTCCCAACATCAGCC | aac(3)-I | aminoglycoside-modifying enzymes |
aac(3)-I -R | ATATAGATCTCACTACGCGC | ||||
22 | 435 | aac(6')-Id -F | ATGATTAGAAAAGCAACTGTCCAAG | aac(6')-Id | |
aac(6')-Id -R | TTAAAGTTGCTTTGTAAAACAAATC | ||||
22 | 519 | aac(6')-Ib -F | ATGACTGAGCATGACCTTGC | aac(6')-Ib | |
aac(6')-Ib -R | TTAGGCATCACTGCGTGTTC | ||||
22 | 284 | ant(3'')-I -F | TGATTTGCTGGTTACGGTGAC | ant(3'')-I | |
ant(3'')-I -R | CGCTATGTTCTCTTGCTTTTG | ||||
22 | 816 | aph(3')-I -F | ATGTGCCATATTCAACGGGAAACG | aph(3')-I | |
aph(3')-I -R | TCAGAAAAACTCATCGAGCATCAA | ||||
22 | 774 | armA -F | ATGGATAAGAATGATGTTGTTAAG | armA | 16S rRNA methylases |
armA -R | TTATTTCTGAAATCCACTAGTAATTA | ||||
22 | 315 | rmtA -F | CCTAGCGTCCATCCTTTCCTC | rmtA | |
rmtA-I -R | AGCGATATCCAACACACGATGG | ||||
23 | 173 | rmtB -F | GCT TTC TGC GGG CGA TGT AA | rmtB | |
rmtB -R | ATG CAA TGC CGC GCT CGT AT | ||||
22 | 846 | rmtC -F | ATGAAAACCAACGATAATTATC | rmtC | |
rmtC -R | TTACAATCTCGATACGATAAAATAC | ||||
23 | 401 | rmtD -F | CGG CAC GCG ATT GGG AAG C | rmtD | |
rmtD -R | CGG AAA CGA TGC GAC GAT |