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. 2018 Mar 6;9:172. doi: 10.3389/fphys.2018.00172

Table 1.

Primer sequences for standard PCR.

Primer name Sequence (5′Inline graphic 3′) Genbank acc. no. position Amplicon length (bp) Ta (°C)
ASIP Exon2Ca GK000013.2b 419 62
 for AAATCAACATCTCGGCTTGG 3–22
 rev CTTTTCTGGGTGCCTGATGT 421–402
ASIP genomica GK000013.2b 430 62
 for AAATCAACATCTCGGCTTGG 3–22
 rev AAAAGGAAAGTGCGGAGGAG 7,089–7,070
MC4R_SNP1 AC_000181.1c 755 57.5
 for AAAATCCTGAATGTTGCCTGG 3,056–3,036
 rev TCCCAATTCAGAGGCAGAAG 2,282–2,301
MC4R_SNP2 AC_000181.1c 601 59
 for TTCTGCCTCTGAATTGGGATTAC 2,300–2,278
 rev GGCTGGGTAGAGTTCATTTTGG 1,700–1,721
MC4R_SNP3 AC_000181.1c 541 58
 for TCGTTTGGGGCAAGTCAAG 1,804–1,786
 rev GATAGTGAAGTACCTGTCCACC 1,264–1,285
MC4R_SNP4 AC_000181.1c 736 59
 for CTCGGTGATCTGTAGCTCCTT 1,339–1,318
 rev CACTCCATGCCCTACACAGA 604–623
MC4R_SNP5 AC_000181.1c 544 57.5
 for TGAAACAGTGCCCAGTCTT 558–540
 rev TAATCCCAAATTGCCTGTGAG 15–35
ATRN_SNP AC_000170.1d 600 57
 for CAGCGAAACTTGGGGTAGAGT 3,416–3,396
 rev GGCCTTCCAGCTCTAGTCG 2,817–2,835
a

Adopted from Albrecht et al. (2012).

b

Nucleotide positions refer to partial sequence of GK000013.2 starting at nt 64,212,950 (i.e., nt 1 in this table = nt 64,212,950).

c

Nucleotide positions refer to partial sequence of AC_000181.1 starting at nt 59,670,000 (i.e., nt 1 in this table = nt 59,670,000).

d

Nucleotide positions refer to partial sequence of AC_000170.1 starting at nt 52,190,000 (i.e., nt 1 in this table = nt 52,190,000).