Table 2.
Primer name | Sequence (5′ 3′) | Genbank acc. no. position | Amplicon length (bp) | Ta (°C) |
---|---|---|---|---|
ASIPa | NM_206843.2 | 181 | 60 | |
for | TACCTTGCTGGTCTGCCTGT | 200–219 | ||
rev | CTTTTCCGCTTCATTTCTGC | 380–361 | ||
MC1Ra | NM_174108 | |||
for | CTGCACTCCCCCATGTACTA | 488–507 | 233 | 60 |
rev | ATGGAGATGTAGCGGTCCAC | 720–701 | ||
MC4Ra | NM_174110.1 | 163 | 60 | |
for | CTGATCGGGGTCTTTGTTGT | 961–980 | ||
rev | GGGCATAAATCAGAGGGTCA | 1,123–1,104 | ||
ATRN | NM_173995.3 | 245 | 60 | |
for | CAGTAATTTCACCTGGCCCATC | 3,780–3,801 | ||
rev | CATCTGTTTCCAAGGCGACAT | 4,024–4,004 | ||
B2M | NM_173893 | 184 | 60 | |
for | CAGCTGCTGCAAGGATGG | 181–204 | ||
rev | ATTTCAATCTGGGGTGGATG | 417–394 | ||
TOP2B | XM_010820383.1 | 173 | 60 | |
for | AAGAAAACAGCACCGAAAGG | 4,519–4,538 | ||
rev | AGGTCTGAGGGGAAGAGGT | 4,691–4,673 | ||
UXT | NM_001037471 | 70 | 60 | |
for | TCATGGCGACGCCCCCTAAAC | 30–50 | ||
rev | AAAGCCTCGTAGCGCAGCACT | 99–79 | ||
RPS9 | NM_001101152.2 | 152 | 60 | |
for | GCTGATCGGCGAGTATGGGCT | 146–166 | ||
rev | GCCGCCGCAACAGGGCATTA | 297–278 | ||
FABP3 | NM_174313.2 | 154 | 60 | |
for | GCGTTCTCTGTCGTCTTTCC | 7–26 | ||
rev | CTTGGTCATATTGCCCACCT | 160–141 | ||
FABP4 | NM_174314.2 | 174 | 60 | |
for | GGATGGAAAATCAACCACCA | 354–373 | ||
rev | TGGACAACGTATCCAGCAGA | 527–508 |
Adopted from Albrecht et al. (2012).