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. 2018 Mar 6;9:383. doi: 10.3389/fmicb.2018.00383

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Copyright © 2018 Bodilis, Denet, Brothier, Graindorge, Favre-Bonté and Nazaret.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Phylogenetic tree from maximum-likelihood analysis of the core-genome alignments of seven Burkholderia cenocepacia strains. In total, 4,555 orthologous proteins were concatenated in an alignment of 1,514,675 amino acids. Bootstraps are indicated in each node. ST, Sequence Type (unique combination of 7 alleles; see Materials and Methods). Two strains belong to the same clonal complex if they share at least four identical alleles.