Table 1.
Raffinose biosynthesis related genes in Sesame.
| Gene name | Locus IDa) | Accession Numberb) | Linkage Group | Start (bp) | End (bp) | Exon number | Protein length (aa) | MW* (kDa) | pI* | Duplications |
|---|---|---|---|---|---|---|---|---|---|---|
| GolS | ||||||||||
| SiGolS1 | SIN_1018104 | XM_011072789 | LG02 | 17749734 | 17751585 | 3 | 339 | 38.41 | 4.82 | Segmental |
| SiGolS2 | SIN_1016153 | XM_011073345 | LG03 | 204802 | 205977 | 4 | 290 | 33.96 | 4.98 | Dispersed |
| SiGolS3 | SIN_1012641 | XM_011081210 | LG06 | 237773 | 239341 | 4 | 340 | 38.71 | 5.79 | Segmental |
| SiGolS4 | SIN_1026653 | XM_011088281 | LG08 | 11164540 | 11166854 | 4 | 333 | 37.97 | 4.94 | Segmental |
| SiGolS5 | SIN_1022773 | XM_011089209 | LG08 | 16345511 | 16347799 | 3 | 336 | 37.70 | 4.96 | Segmental |
| SiGolS6 | SIN_1022774 | XM_011089210 | LG08 | 16353437 | 16354675 | 3 | 306 | 35.07 | 4.75 | Tandem |
| SiGolS7 | SIN_1025925 | XM_011093877 | LG10 | 13337551 | 13339272 | 3 | 322 | 36.92 | 5.44 | Segmental |
| RafS | ||||||||||
| SiRS1 | SIN_1020329 | XM_011073865 | LG03 | 4924917 | 4928632 | 4 | 779 | 86.75 | 6.60 | Dispersed |
| SiRS2 | SIN_1020252 | XM_011073696 | LG03 | 5530701 | 5534982 | 13 | 884 | 97.39 | 6.15 | Segmental |
| SiRS3 | SIN_1020251 | XM_011073698 | LG03 | 5545742 | 5549293 | 14 | 761 | 83.93 | 5.27 | Tandem |
| SiRS4 | SIN_1006202 | XM_011076928 | LG04 | 940755 | 945069 | 12 | 768 | 84.26 | 5.61 | Segmental |
| SiRS5 | SIN_1013540 | XM_011080080 | LG05 | 5970786 | 5974158 | 5 | 865 | 94.85 | 6.07 | Segmental |
| SiRS6 | SIN_1023532 | XM_020693952 | LG05 | 13038353 | 13041972 | 12 | 768 | 84.35 | 5.79 | Segmental |
| SiRS8 | SIN_1007330 | XM_011085808 | LG07 | 6751484 | 6754372 | 4 | 765 | 84.68 | 5.79 | Segmental |
| SiRS9 | SIN_1007333 | XM_011085817 | LG07 | 6786084 | 6789045 | 4 | 755 | 83.69 | 5.97 | Proximal |
| SiRS10 | SIN_1026883 | XM_011087990 | LG08 | 9189292 | 9193596 | 14 | 792 | 87.42 | 5.50 | Dispersed |
| SiRS11 | SIN_1026329 | NA | LG08 | 14107419 | 14108200 | 3 | 198 | 21.36 | 5.12 | Segmental |
| SiRS12 | SIN_1026328 | XM_011088697 | LG08 | 14110902 | 14114536 | 14 | 750 | 82.35 | 5.21 | Tandem |
| SiRS13 | SIN_1014290 | XM_011097309 | LG12 | 1710058 | 1713804 | 12 | 789 | 87.31 | 5.64 | Dispersed |
| SiRS14 | SIN_1007882 | XM_011100134 | LG15 | 130561 | 133205 | 4 | 784 | 86.59 | 5.50 | Dispersed |
| StaS | ||||||||||
| SiRS7 | SIN_1012629 | XM_011081231 | LG06 | 315049 | 317941 | 4 | 862 | 95.64 | 6.07 | Dispersed |
| SiRS15 | SIN_1003607 | XM_011102449 | scaffold00109 | 425302 | 429067 | 4 | 847 | 94.96 | 5.83 | NA |
a)Locus ID was adopted from Sinbase (Sesamum indicum genome database, http://ocri-genomics.org/Sinbase/index.html).
b)Accession Number was adopted from NCBI (The National Center for Biotechnology Information, https://www.ncbi.nlm.nih.gov/).
*MW: Molecular Weight; pI: Isoelectric point; NA: not available.