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. 2018 Mar 12;8:4374. doi: 10.1038/s41598-018-22307-8

Figure 1.

Figure 1

Isolation and molecular characterization of KPF1 hmAb. (a) Gating strategy to isolate peripheral blood plasmablasts (CD19 + IgD-CD38 + CD27++) 7 days after immunization. (b) Alignment of KPF1 VH and Vk with presumed germline amino acid sequences. (c) Phylogenic analysis of KPF1 lineage members based on amino acid sequence. Lineage members defined as same heavy chain V and J gene usage, HCDR3 length, and ≥85% HCDR3 similarity. Germline sequence is represented by green diamond, sequences obtained from single-cell plasmablast sequencing are represented by orange squares, the KPF1 mAb sequence is represented by the red square, sequences obtained by MiSeq-based deep sequencing of bulk total B cells are represented by blue squares, inferred intermediate sequences are represented by blue circles. Red line indicates the inferred pathway from germline to KPF1 hmAb. Size of symbols are proportional to the number of identical sequences obtained of an individual lineage member (N = 1–55), with the exception of the germline and KPF1 mAb sequences.