Table 1. Examples of proteins identified by enChIP-MS.
| Gene name | Sample | Category | |||
|---|---|---|---|---|---|
| gD4Z4 | gMYOD1 | ||||
| # peptides* | % coverage† | # peptides* | % coverage† | ||
| CBX3/HP1γ | 4.7 | 15.7 | 0.0 | 0.0 | Known D4Z4-associated proteins |
| NCL | 47.4 | 22.3 | 34.0 | 14.2 | |
| PDS5B | 2.0 | 11.2 | 0.0 | 0.0 | |
| RAD21 | 1.8 | 2.9 | 0.0 | 0.0 | |
| SMC1A | 7.0 | 5.8 | 2.0 | 1.8 | |
| SMC3 | 17.0 | 6.7 | 1.0 | 1.0 | |
| SMCHD1 | 1.6 | 2.4 | 0.0 | 0.0 | |
| CHD4 | 8.3 | 3.1 | 0.0 | 0.0 | NuRD complex components |
| HDAC2 | 2.5 | 5.6 | 3.0 | 6.8 | |
| MTA2 | 1.2 | 2.2 | 1.0 | 1.5 | |
| RBBP4 | 4.5 | 7.5 | 4.0 | 6.9 | |
*Average number of peptides recovered from each sample type, combining like (gD4Z4 or gMYOD1) immunoprecipitations.
†Average percentage of each protein covered by the identified peptides from each sample type, combining like (gD4Z4 or gMYOD1) immunoprecipitations.